Elaeis guineensis (African oil palm): 105047434
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Entry
105047434 CDS
T03921
Name
(RefSeq) nuclear pore complex protein NUP85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105047434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105047434
03036 Chromosome and associated proteins [BR:
egu03036
]
105047434
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105047434
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105047434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
105047434
NCBI-ProteinID:
XP_010924652
UniProt:
A0A6I9RD70
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Position
6:complement(7516652..7528023)
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AA seq
719 aa
AA seq
DB search
MPGLASDPGDSLVPFLPDVRDPVVYPVRHGVNPPIFRVYVSWTRGNFLQVACLRPPAAEP
AGGEEDGVSDEEIGGKVVEVKLGAGDEEISEAQRRRIAYGSVPAFALLQSRKNSLAAMSR
MSASSIRTEWWEHVLEYSRHISDLLGNPMLPSSTVIEDPKMIMQPHEEPTTLKAAWQLME
IFYVDKLSSTWLPERLVDWLADYDSLLTETTIHSKVEGLQKRLSSLKVVVEDDPEYWEGM
SGALAAGWLDAVVKLLRLHGSYQLEQLGSRETENGLVEAVAVLVSTMPRMRPHLPAGRLG
QCYKTKPDFIKAWEKWRLHISRLDSSTFWVQCSHHQTREGLRNLLQIMLGNISNLRAATC
HWMELFISHFLYIRPLTMGLDEFHSLAQKCMQLKSSSSSNGLMGLFIGILGENPEVVLAE
CSKTLGPWMVAHAMELLTVDNGHADILLHEERYSLGDISIEELHRLVYAQVLSSHPLTWQ
IAPTYLASCPKQGLGLLEILLYKQPVQHYQMILKNLEICRLYELENISSSIMKIAGTYHW
KHGRKGSGVYWLQQARDEVRLNKIAQQLFECIGKSISDDSFKQWEGLIELLGSQVGTAGG
LEFLHKYRDFKRSLQQVQDGSPVDAARQTMESLMQLMKNSSTPQRFWLPLLHDSVKLLNW
KAQPLLTVSETNLLLNKLQELSMVKLHPDFCESNLPPQALSSVRLALATNLGRAVLEEC
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcctagcgtcggatcccggcgattcccttgtccccttcctgccggatgtccgc
gacccggtcgtctaccctgtccgtcacggtgtcaatcccccgatcttccgcgtttatgtc
tcctggacgagggggaacttccttcaagtcgcgtgccttcgtcccccggcggcggaaccc
gccggcggcgaagaggacggagtttcggatgaagaaatcggcgggaaagtagtggaggtc
aagcttggcgccggcgacgaggagatcagtgaggcccagaggcggagaatcgcgtatggc
tctgttcctgcctttgcgttgctccagagtcggaagaattccctcgcggccatgtcaaga
atgtctgcatcttcgattcgcacggaatggtgggaacatgttttggagtacagtcgtcat
ataagtgatcttcttggtaatcccatgcttccttctagcacagtgattgaggaccctaag
atgattatgcagcctcacgaggaacctaccacattaaaggctgcatggcagctaatggaa
atattttatgtggataagctgtcatcaacttggcttccagagcgccttgtcgattggtta
gcagattatgacagcctcctgacagagactacaatccactcaaaggttgagggcctgcaa
aaaaggctttccagtttaaaggtggtagttgaggatgatcctgagtactgggaaggaatg
tcaggagcacttgcagctgggtggcttgacgctgtggtgaaattgttgagattacatgga
tcttatcaactggagcaacttggcagccgtgagacagaaaatgggctggtagaggcagtt
gctgttcttgtctccacaatgccacgcatgcgtcctcatctaccagctggaagattaggt
caatgctataaaactaaaccagattttatcaaggcatgggagaaatggcggctccatata
agtagattagattctagtactttttgggttcagtgcagccatcaccaaactcgagaaggt
ttgaggaacttgttacagatcatgctgggaaacattagcaatcttagagctgcaacttgt
cactggatggagctgtttatttctcacttcctctacataaggccacttacaatgggccta
gacgagttccatagcttagctcagaaatgcatgcaattgaaatcatcctccagttctaac
gggctgatgggcctcttcattggtattcttggagaaaatcctgaggttgtgttagcagaa
tgctcaaagacattgggaccatggatggttgcccatgccatggaattgttgacggtcgat
aatggtcatgctgacattctattgcatgaggagaggtacagcttgggagatatcagcata
gaagaactccaccgacttgtgtatgctcaagttttgtcttctcatcctttgacttggcaa
attgcaccaacatatctagcatcatgcccaaagcaaggtttgggtctgttagagatttta
ctgtacaaacagcctgtgcaacattatcaaatgatacttaagaatcttgagatttgccgt
ttatatgaactggaaaacatcagttcaagtattatgaagattgctggcacataccactgg
aagcatggtaggaagggttctggtgtttactggctccaacaagcacgtgatgaagttcgg
ctcaacaaaattgctcaacagctatttgaatgtattgggaagtcaatctctgatgacagt
ttcaagcaatgggagggattaattgaacttcttggttcacaagttgggactgcaggaggc
ctcgaatttctccacaagtatcgggattttaagaggtcccttcagcaggtgcaagatgga
agtcctgttgatgctgctcggcagactatggaatcacttatgcagcttatgaaaaattca
tcaacaccacaacgtttctggcttcctctgctgcatgattcagttaagttgctaaactgg
aaggctcagccgctattgactgtatctgaaacgaatctattattgaacaaactgcaagaa
ttatccatggtgaagctgcacccagatttctgtgaatccaacttgccgcctcaggccttg
agctctgtcagattggccctggctacaaatctggggcgtgctgttcttgaagaatgctga
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