Elaeis guineensis (African oil palm): 105047764
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Entry
105047764 CDS
T03921
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egu03036
]
105047764
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
egu00535
]
105047764
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
105047764
Meiosis-specific proteins
Cohesin complex and associated proteins
105047764
Proteoglycans [BR:
egu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105047764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
APG6_N
EzrA
Peripla_BP_2
Motif
Other DBs
NCBI-GeneID:
105047764
NCBI-ProteinID:
XP_010925132
UniProt:
A0A6I9RE84
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Position
6:796626..817738
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AA seq
1204 aa
AA seq
DB search
MYIKKVIIEGFKSYKEQVSTDPFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVVSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHVTKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIDQVVQYLEERLRELDEEKEELKKYQQLDKQRRSLEYTIFDKELHDARQKLG
EIEEARKKVSEKSTSMHNTVLDAHEKLKSLDKEFKVFTKEIQGLNKEKEMIEKKRTEALK
VHTQIELDLRDLEERISGDVRAKEEAARQLESLRKEIQESRDELNTIRPLHQSKVAEEEE
IAKGIMDREKQLSILYQKQGRATQFASKAARDKWLQREIDDLQRVLSSNMAQEKKLQDEI
QQLKDEDSKLGAYIEERRAELKKQELLITKGQEDFNSLRGQRDELQDSRKSLWKKETDLS
SEIDRLKADLVKAQKSLDHATPGDIRRGLNSVNRIIKDHGIKGVFGPILELIECDEKFFT
AVEVTAGNSLFHVVVETDEISTRIIRYLTAEKGGRVTFIPLNRVKVPQITYPQSPDVVPL
LKKLKFRSDYAPAFSQVFGRTVICRDLDVATKFARTNSLDCITLEGDQVSKKGGMTGGYY
DFRRSKLKFVNIIRQNKLSIHAKTVELDEIEKKLKEIEQEINKLVSEQQKMDAHRGHIKS
ELEQLKNDISNATKQKKSIAIALEKKEKLLANAHNQIDQIRAGIAMKQAEMGTDLIDQLT
LEEKDLLSRLNPEITELKEQLLACKTSRMDIEARKEELETNLSTNLVRRQQELEAIILSA
DSDNLPMEAEAKRQELKNSKATIDELTQQLKAVVENIDSLTKKSREIRNSKEKLKTLEEN
YERTLQDEAKDLEQLLNKRNILHAKQEDCMKKIRDLGSLPSDAFETYKRKSMKELQKMLH
KCNEQLTQFSHVNKKALDQYMNFTEQREQLQRRRAELDAGDQKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDLGDDDHDEDGPRDPDPEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVADQIYGVTHKNRVSHVNVVSKDQALDFIEHDQT
HNTD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagaaggttatcattgaagggttcaagagctacaaagaacaagtttctaca
gatccgttcagccctaaagtaaactgtgttgttggcgccaatgggtcgggaaaaacaaac
tttttccacgccatacgttttgtccttagtgatcttttccagaatctgcgcagtgaagat
agacatgcccttcttcatgagggtgcagggcaccaggttgtatcggcttttgtggagata
gtatttgacaattctgacaaccgcattccagttgataaggaggaggtgcggttgcggagg
acaattggtctgaaaaaggatgaatactttttggatgggaagcatgtcactaaaacagaa
gtgatgaatttgctggagagtgctggtttctctcgctcaaatccatactatgttgttcag
caagggaagatagcatctctcactttaatgaaagactctgaacgtctggatcttcttaag
gagattgggggtacgcgtgtttatgaggaaaggcgacgtgagagcttgaaaataatgcaa
gaaactggtaataagagaaagcaaatagatcaggttgttcagtacttggaggagagattg
agggaacttgatgaagaaaaagaagagctgaaaaaatatcagcaacttgacaagcaacga
aggtcactagaatataccatttttgataaagaacttcatgatgcgaggcagaaattaggg
gagatagaagaagcccggaagaaagtttctgagaagtcaaccagcatgcacaatactgtg
ctagatgcccatgaaaagcttaagtcattggataaggaattcaaagttttcacaaaagag
atacaaggattgaacaaagagaaagagatgatagagaagaagcgaactgaagcattaaaa
gtgcacacgcagattgaacttgatttgagagacctggaagagagaatttctggagatgtc
cgagccaaggaggaagctgcaaggcagttagaaagcctgagaaaagagatccaggaatcc
agagatgaactcaatactatcaggcccttacaccagtccaaagtggctgaagaggaggaa
attgctaaaggaataatggatcgtgagaagcagctgagcattctgtaccaaaaacaagga
cgtgctacccagtttgcaagtaaagcagctcgggataaatggctgcaaagggaaattgat
gaccttcagcgtgtgctttcatcaaatatggcacaagagaaaaagcttcaggatgaaatc
caacaactcaaagatgaggatagtaagttgggggcatatattgaggagcgaagagctgaa
ttgaaaaagcaggagctgctcatcacaaagggccaagaagattttaacagtttaagagga
cagagggatgaactgcaagattcaaggaagtctttgtggaagaaggaaacggatctttct
tctgaaattgataggcttaaagccgatctagtaaaggcacaaaagagtctggaccatgct
acacctggtgatatcagaagaggactgaattctgtcaacaggatcatcaaggatcatggt
atcaaaggagtatttggtccaatattagaactgattgaatgtgatgaaaaattttttact
gctgttgaagtcaccgctggaaatagcttatttcatgtggtggttgaaacggatgagata
tcaactaggataattagatacctaactgcagagaaaggtggacgtgtgacttttatacca
ctaaacagagtgaaagtcccacaaataacttatccacagagtcccgatgtagtacctttg
ttaaagaaattgaaattccgttctgactatgctcctgctttttcacaggtgtttggcaga
acggtgatatgccgggacttggatgtagctacaaagtttgctcgaactaatagtcttgat
tgcatcacattagaaggtgaccaagtaagcaagaagggtggtatgacgggaggatactat
gattttaggcgttcaaaactgaaatttgtgaacataattaggcaaaataagttgtctatc
catgcaaaaacagtggaactagatgaaattgagaagaaacttaaagagatagaacaggaa
attaacaagttggtaagcgaacaacagaaaatggatgcacaccgtggccacatcaagtca
gagttggaacaacttaaaaatgacatttctaatgcaactaagcagaagaaatcaattgcc
atagctcttgagaagaaggagaaattgcttgcaaatgcacataaccaaattgatcagatc
cgagctggcattgcaatgaaacaagctgagatgggcacagatctcattgatcaactaaca
ctagaggaaaaagatcttctttctcggttaaatcctgaaattacagaattgaaagaacag
cttctggcttgcaaaactagtcgaatggatattgaggcaagaaaagaagaactagagaca
aatttgtcaacaaaccttgtgagacgacagcaggagttggaagccattattttatctgca
gattctgacaacttgcccatggaagctgaagcgaaaaggcaggaattaaagaactctaaa
gcaactattgatgaattgacacagcagcttaaagctgttgtggaaaatatagatagtctt
acaaagaaatcacgggaaataagaaattcaaaagaaaaactaaagacacttgaagagaac
tatgagaggacacttcaagatgaagcaaaagatttggaacagttgttgaacaaaaggaat
atacttcatgccaaacaagaggattgcatgaaaaaaattcgagatttgggttcattacca
tctgatgcttttgaaacgtataaaaggaaaagcatgaaagaattacagaagatgcttcat
aagtgcaatgagcagttgacacagtttagccatgtcaacaagaaggctcttgaccaatac
atgaacttcacagagcaacgcgaacaactgcagagaagacgagcggaacttgatgcaggt
gaccagaaaattagagaattgatttcagttttggatcaaaggaaggatgaatctattgaa
cgcacattcaaaggtgtagcaaggcattttcgagaagtattttctgaacttgtgcaaggt
ggtcatggttacctggtcatgatgaagaaaaaggatggtgaccttggtgatgatgatcat
gatgaggatgggccccgtgatccagatcctgaaggaagagttgagaaatacattggagtt
aaagtgaaggtttcttttactggccagggagaaactcaatcaatgaaacaattgtcaggt
ggtcagaaaactgtcgtggcattgacactgattttcgccatccaacgatgtgatcctgct
ccattttatctgtttgatgagattgatgcagcattagaccctcaatacaggactgctgtt
ggaaatatgatccgccgtctagctgacatggcaaatactcagttcataaccaccacattc
cgcccagagcttgtgaaggttgctgaccagatttacggtgtgacacacaagaacagagtc
agccatgtgaatgtggtttcgaaggatcaggctcttgatttcattgagcatgaccagaca
cacaatactgactaa
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