Elaeis guineensis (African oil palm): 105048600
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Entry
105048600 CDS
T03921
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
egu03015
mRNA surveillance pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105048600
09122 Translation
03013 Nucleocytoplasmic transport
105048600
03015 mRNA surveillance pathway
105048600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105048600
03041 Spliceosome [BR:
egu03041
]
105048600
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105048600
Spliceosome [BR:
egu03041
]
Complex C
Other components
EJC/TREX
105048600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
105048600
NCBI-ProteinID:
XP_010926248
UniProt:
A0A6I9RGR1
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Position
7:complement(84066010..84075811)
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AA seq
645 aa
AA seq
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MSSPYPVLNNKPIDQWKVTELKEELRRRKLPVKGLKEDLVKRLDEAVRNENESTNEEVDN
GLDPAPDPKDNGDQEEADLPAEAHTEFVVDQVEKTDNDATMADMDCGPLDVNQSVKVQDG
DPLPVMGSDAAAGESSFNAASMEDSVDESKIVTLNNDSSGQELRHDEKHEDSKPTMDDVK
LSPSEPNNQVSEVSPDLGSQVKCESISIDSVSIIEKNELKDNLNADNFHLEVVKPEMVQT
SSSNDPPIGGDLHPLDDDKELVKNQVSLEETNAKYATHMELSKKEDSADGGSPEKLNLDR
SSGDESMEEDVLESKHIESNIKSDELGEKTEASKMHAEEKETSVDAVGGGSALEKKDTVD
EEELGPTALEKRKLEDAEAVGSNEPIKRQRRWNSENIKVPERQTSNLSTSSAHKDAVQPT
KRTFSRSDSTLSGDSPKERIVPPSQKPATTSLRIDRFLRPFTLKAVQELLAKTGTVCSFW
MDQIKTHCYVTYSSVEEAVATRNAVYNLQWPPNGGKLLVAEFVDPQEVKMHVEAPPQSPG
PISPSPTTPKASPFQQPQASQPPRQNALRQQLPPPPPLPPPPPLSDPPVRERLPPPPPPK
KPEPPVVTLDDLFKKTKANPRIYYLPLSEEQVAAKLAAQGKSIRE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaccgtatccggttctcaacaacaaacccattgatcaatggaaggttactgaa
ttaaaagaagagcttcgtagaaggaagttgcctgttaagggtctgaaggaggacctggtg
aagcggttagatgaagcagttcgaaatgagaatgaatcgactaatgaagaagtggataat
ggccttgatcctgctccagatcctaaggacaatggtgatcaagaggaagcagatctgcca
gcggaagctcatactgaatttgtcgtagatcaagttgagaaaactgacaatgatgccact
atggctgacatggattgtggccctctggatgtcaatcaaagtgtcaaagttcaagatggg
gatccattgcctgttatgggatcagatgcagcagctggggaatcatcatttaatgcagct
tccatggaagacagtgtggatgaaagcaaaatagtgactcttaataacgattcaagtggt
caagagttgagacatgacgaaaagcacgaggattcaaagcctaccatggacgatgtcaag
ctcagcccttcagaaccgaacaatcaggtatctgaggtcagcccagatttagggtcccaa
gtaaagtgtgagtcaatttctattgattctgtgtcaattattgaaaaaaatgaactaaag
gataatttgaatgctgacaattttcatttagaagttgttaaaccggagatggtgcaaaca
tcatccagcaatgatcctcccattggtggtgatttgcaccccttggatgatgacaaagag
ctggttaagaaccaggtctctttggaagaaaccaatgccaaatatgctacacatatggaa
cttagcaagaaagaagatagtgcagatggaggttctccagaaaaattaaatttagatagg
agttctggtgatgaatcgatggaggaggatgtcttggaaagtaaacatattgagtccaat
attaagtctgatgaactgggagaaaaaactgaggccagcaaaatgcatgctgaagaaaag
gagaccagtgttgatgctgtggggggtgggtctgctcttgaaaagaaggatactgttgat
gaggaggagttggggcctacagctctcgagaagagaaaacttgaagatgctgaagctgtt
gggagcaatgagccaataaagcggcaacgtcggtggaattcagagaacatcaaagttcca
gaacggcaaacatctaatctcagcacttcaagtgcacacaaggatgcagttcaacctact
aagcgtacattcagcaggtctgactcaacactcagtggagattccccgaaggagcgtatt
gtgccaccatcacagaaacctgccacaacttccctgagaatagatcgttttttgcgtccc
ttcactctgaaagctgttcaggagctgcttgcaaaaactggaaccgtctgcagtttctgg
atggaccaaatcaagacgcactgctatgtaacttattcatctgttgaggaagctgtagca
actcgaaacgctgtctacaatctccagtggccgcctaatggtggtaaacttctagttgcc
gagtttgttgaccctcaagaagtaaagatgcatgttgaggccccaccacaatcacctggt
cccatcagtcctagccccacgacgccaaaggcatctcccttccagcaaccccaggcatcc
caaccgcctcgtcaaaatgcccttaggcagcagcttcctcccccaccacccctccctcca
ccaccacctctatctgatccccctgtcagggaacggcttcctccaccacctccgccaaag
aaacccgaaccacctgttgtgacacttgatgatctcttcaagaaaacaaaagccaaccca
aggatctactatctacccttgtctgaagaacaggtggcagctaaacttgcagcacagggc
aaaagcatcagagagtag
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