Elaeis guineensis (African oil palm): 105048979
Help
Entry
105048979 CDS
T03921
Name
(RefSeq) uncharacterized protein isoform X4
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105048979
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105048979
Surveillance factors
Other surveillance factors
105048979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
105048979
NCBI-ProteinID:
XP_010926803
UniProt:
A0A6I9RIG9
LinkDB
All DBs
Position
7:71208738..71228253
Genome browser
AA seq
1637 aa
AA seq
DB search
MAEGKADRPEDLVLSKPAVEAWAGKDVLSGGNEEEKVLMGFLDESKDQASSDNSIPLSPQ
WLYAKPIESKIGLSAASGDIRPPNSLTHGTLFDSAQKDVWRLDGSQDKKERRRNVPDVES
TRRWREEERETSLLGRRERRKEGDRDIEYRKNDRRSDNTSRETSDSWTLPSSDRWLDVPG
RSAVHEVRRDSKWSSRWGPEDKEKDPRTEKKMDVEKEDSHTEKQSFVGNLRPLSESDSRD
KWRPRHRQEVSSGGSAVYRAAPGFGLERGRVEGPIVGFAPGRGRSNSIAGLPFKSSSSGP
IGAAPAFKTENVLGKSGLSVETFRYPRGKLLDIYRKHKMLPSSDTPPAVLEEVPFITQSD
AVTPLAFVAPDANEEALLDDIWKGKVTSSEVAYGSTKDRTERENDSEIELDSRHVESKDP
GAMTAVTDNDACYDIRVSGCNITNSEGERNVLNDDGCMRRPDLKNAKFEVSSSVVPLDVS
AKLPDDLNSLFDTSIIHKIPNSNEQLQNSDAEVKLLKQCTSPDELSLFYRDPQGAIQGPF
LGADIIKWFEEGFYGADLPVCLSDAPEGTPFRPLGEVMPHLKLKSQSGPANVSGEKSEAL
DSLKGNLEDFVPASDITDSFAMNDPQWVPSRLRDAPGHQIKPTSAEHEASVDSINDRLSL
SNIGQSFHDFAGQDSEEVLYTGRPASGMEKPLGKLANDHIDLSRTSSGLHLMGAEMGEAS
LANHKIPRDNDLNPLGLLWSELEGTHPKHPLSTNIASFGDQSIDNHAATRDASRFKHQQD
HFSLIGDSPNIHDAWPSNSRRNTNSSVLQEAIDSSRLSRFEAEANQFSLEEHLLSQQLQK
QHLQQQQLLARQNLDLAGPFLEQIRSSVHQQQSIGQPTPDVEHLLKLQYEQQRYLQQLQH
QHQLHQQQQQLHQHQMQLLQQHQHQQQQQQQQQQQQQQQLLLEQLLHQQLQNTGFGALHV
DYRRANNMLDEVLFRQQLLNESQQQSRHLPLHHDPAIEQLIQSKFGYNLQRENHDELLEL
LSHSKRRQMLPLEQQLLLGLQQEQLEARQFSVPSRQPPGMEEERHVGGIWSIDESGQFIR
AAAGPHQTHSGRLNQLDFMQPPQRPLSFEQPSQLEQNFMLHEQMQRGLYEPSLHPVERSI
PLPAGTPAPNVDFVNTLGRFQGLDTQEQHSHVQSSGQKGQFPSTIRSHQHRISEQLSGSH
MDAMERHWSGSNGQLSDKLIESHFNQLQIEAERQRRDMKANCTVEDPNSWASIAGNSGNS
ERGLGDLLHQKLVLQSQQSLGLVDSVPTSSYEHRDPSWLYSQSSTDSSFNLTSDRLGLGD
SMSEGFVKVGHAPHERLANVNLEGQVNSFESSGRLAFRSNSGTLPEQKHLLTDIVEIEKE
HFAHSMGGDASIEGIDFSGVKEGKKGKKHGSKGKSMDKLVIDALKSGVEQPSGKNNEDLK
VSGPIRHASFGSTGGVGGFFNYEMGADSAYSEEMINDGIAGAFVKGADNSLLKCTRDLHV
ISSQGASSEIDSAPTKGKNSTSFASLEDGRREAGGNLIVRTSETPASIRKDLRFRRTASS
SDADVSEPSFIDMLKSTKKPLPDADSSTGAAEATDAGLGGKSSKKKGKKGRQIDPSLLGF
KVHSNRILMGEIQRPDD
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagggaaggcggatcggccggaggatctcgtgctctccaagccggccgtggag
gcctgggccggcaaagatgttctttcaggtggaaatgaggaggagaaggttctcatgggg
tttctggatgaatcaaaagatcaagcatcttctgataatagtattcctttgtctcctcaa
tggctctatgcgaagcctattgaaagcaagattgggctttctgctgcatctggggatatt
cgcccaccaaattctttgacccatggaaccttgtttgattcggctcagaaagatgtgtgg
cgtttggatggatctcaagataagaaagaacggagaaggaatgttcctgatgttgaaagt
actcgccgctggcgtgaagaggagagggaaactagcttgcttggtaggagagaacgtaga
aaggaaggagatcgagatattgagtaccggaaaaatgaccgccgttcagacaatacttct
agagaaacttctgattcttggactttgccctcatctgatcggtggcttgatgttcctggt
cgcagtgcagtgcatgaggttcggcgtgacagtaaatggtcgtcaagatggggtccagaa
gacaaagagaaggaccctcgaacagagaagaagatggatgtagagaaggaggattctcac
actgaaaaacaatcttttgtcggtaatcttcgccccttgtccgaatctgattctcgtgat
aaatggagaccacgtcatcgacaagaagtttcttctggtggatctgcagtatatcgtgct
gctcctgggtttgggctagagagaggacgtgtggagggtccgattgtggggtttgctcct
ggcaggggtaggtcaaactccattgcgggcttgccatttaagtcatcctcttctggacca
attggtgctgcacctgcatttaagactgaaaatgtacttggaaagtctggattatctgtg
gagacatttcgctacccaagggggaaacttcttgatatttacagaaagcacaagatgttg
ccatcttctgatactccccctgctgtcctcgaggaagttcctttcataacacagtctgat
gctgtaacaccactggcctttgttgcacctgatgcaaatgaagaggctcttttagatgac
atttggaaggggaaggttaccagcagtgaagtagcttacggttctactaaggataggacg
gaaagagaaaatgacagtgagatagagctggattctcgccatgttgaaagcaaagatcct
ggtgctatgactgcagttacagacaatgatgcttgctatgatataagggtgtcaggttgt
aatattaccaattctgagggtgagagaaatgttcttaatgatgatggatgcatgcgacgc
ccagatctcaagaatgctaagttcgaagtgtctagctcagttgttcctttggatgttagt
gctaagctacctgatgatttaaattcattgtttgatacatcaatcatccacaagattcca
aacagcaacgagcagcttcagaacagtgatgctgaagtaaaacttttaaaacaatgcact
tctcctgacgagttgagtttgttttaccgggatccccaaggagcgatacaagggccattt
ctaggtgctgacatcatcaagtggtttgaagaaggcttttatggtgcggatttacctgta
tgtttgtcagatgctccagaaggcactccttttcggccgcttggtgaagttatgccacac
ttgaaactaaaatctcaatctggccctgctaatgtttctggcgaaaaatctgaagcattg
gactctttgaaaggaaacctggaggattttgttcctgcttctgatattactgattctttt
gccatgaatgacccacaatgggtaccatctagattgagggatgctccgggtcatcagatt
aagcctacaagtgctgaacatgaagcttctgtagattctataaatgataggttgtcactt
tccaacataggacaaagctttcatgattttgcgggacaagattctgaagaagtgttgtat
acaggaaggcctgcaagtggtatggagaaacccttggggaagcttgctaatgaccatatt
gatctatcacggacctctagtggtctccatttgatgggtgctgaaatgggagaagccagt
ttagccaaccataagattccaagagataacgatttgaatcctctcggattgttgtggtct
gaactggaaggaactcatccaaagcaccctctctcaacaaatatagccagcttcggtgat
cagagcattgataatcatgcagctacaagagatgcatctcgttttaaacaccaacaagat
cattttagtctgataggtgactcccccaatattcatgatgcatggcccagtaactccagg
aggaacactaactcaagtgtacttcaggaagctattgattctagtcgcttgtcacgcttt
gaagctgaagcgaaccagttcagtttagaagagcacctgctttcccagcagttacagaaa
cagcatcttcaacagcaacagttgcttgctcgtcaaaacttggatttggctgggccattt
cttgagcagatcaggagttctgtccaccagcagcagtcaattggtcaacctacaccggat
gtggagcatcttttgaaacttcagtatgaacagcagcgttatcttcagcagttgcagcat
caacatcaactgcaccaacaacaacaacagcttcatcaacaccagatgcaattgctgcag
cagcatcagcatcagcagcagcagcagcagcagcagcagcagcagcagcaacagcagttg
cttcttgagcaattgttgcatcagcaattacagaacactgggtttggagcattgcatgtc
gactatcgacgggcaaataacatgcttgatgaggttttatttaggcagcagctcttgaat
gagtcacaacaacagtctcggcatctaccgttgcaccatgacccagctattgaacagctt
atccaatcaaaatttgggtacaacctgcaaagggaaaatcacgatgagttattggagtta
ttgtctcattccaagcgcaggcagatgcttcctttggaacagcaacttcttttgggtctt
cagcaggagcagctggaagcaaggcaattctctgttccatcgaggcagccacctggcatg
gaagaagagaggcatgttggtgggatttggtcaatagatgaatctggccagttcatcagg
gcagcagctggaccacatcagactcattctggtagacttaaccaattagatttcatgcag
ccccctcagaggccgttgtcctttgagcaacccagccaacttgagcagaactttatgttg
catgagcaaatgcagcgagggctttatgaaccaagcctacatccagttgaaaggtcaatt
cccctacctgcaggtactcctgcaccaaatgtggattttgtcaataccctaggacggttt
caaggactggatacacaggaacagcacagtcatgtgcaatcatctggccagaagggacaa
tttccttcaactattcgttctcatcaacatcggatttctgaacagctttctggttcgcac
atggatgcaatggagaggcattggtccggatccaatgggcagctatcagataagttaata
gaatcacatttcaatcagttgcagatagaagcagaaagacagaggagggatatgaaagca
aattgtactgttgaggacccaaattcatgggcatcgattgcaggaaatagtgggaactca
gaacgtggattaggagacttgcttcaccaaaaactggttcttcaatctcaacagtcacta
ggattggtagatagtgttcctacatcatcctacgagcacagggatccgtcatggctttat
tcacagtctagcactgatagttcctttaatcttacttctgatagactgggcttgggtgat
tcaatgtcagaaggtttcgttaaagtaggacatgcaccacatgagcgattggcgaatgta
aatttggaaggacaagttaatagcttcgaaagcagtggaagattagctttccgatcaaat
tctggaacattacctgaacagaaacacctccttacagatattgttgaaattgaaaaagaa
cattttgctcattccatgggtggtgatgcatctatagagggaatcgatttctctggtgtg
aaggaggggaagaaggggaagaagcatggttctaagggcaaatcaatggataaattagtt
atagatgctctgaaaagtggggtggagcaaccaagcggcaaaaataatgaagatttgaaa
gttagcggacccattagacatgcctcatttggcagcactggtggggttggaggcttcttc
aattatgaaatgggagctgatagtgcttatagtgaagagatgattaatgatgggattgct
ggtgcttttgtaaaaggggctgataattccctactgaaatgtacccgtgatctgcatgtc
atatcatctcagggagcatcgtcagagatagattctgctcctaccaaggggaagaattct
actagctttgcatcgttggaggatggaagacgagaagctggcggtaatctgattgtccga
acttcagaaactccagcctcaatcagaaaggacctgagatttcgtcgtacagcttcaagt
agcgatgctgatgtatcagaaccttcatttatcgacatgctgaagagcaccaaaaagccc
ttgccggatgcagattcttccaccggcgctgcagaggcgacagatgctggtctgggcgga
aagagcagcaagaagaaaggtaagaaggggaggcagattgatccctctcttcttggtttc
aaggtccatagcaaccgcattttgatgggtgagatccaacgcccggatgattaa
DBGET
integrated database retrieval system
