KEGG   Elaeis guineensis (African oil palm): 105049144
Entry
105049144         CDS       T03921                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03018  RNA degradation
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105049144
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105049144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105049144
   03041 Spliceosome [BR:egu03041]
    105049144
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105049144
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105049144
Spliceosome [BR:egu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105049144
SSDB
Motif
Pfam: LSM DUF7452 Ntox4
Other DBs
NCBI-GeneID: 105049144
NCBI-ProteinID: XP_010927014
UniProt: A0A6I9RIE3
LinkDB
Position
7:complement(12353833..12364098)
AA seq 87 aa
MSHNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR
RITKLDQILLNGNNIAILVPGGSPDPE
NT seq 264 nt   +upstreamnt  +downstreamnt
atgtcacacaacccttctcagctcctcccttctgagttgattgatcggtgcatcggatcg
aagatatgggtgataatgaagggtgacaaggagctcgtcggaacgcttaggggtttcgat
gtctatgtcaatatggtcctcgaagatgtcaccgaatatgaaatcacagctgaaggtcgc
cggataacaaagcttgatcagatactgctgaacggcaacaatattgccatcctggtccct
ggtggttctcctgatccagaatga

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