Elaeis guineensis (African oil palm): 105049929
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Entry
105049929 CDS
T03921
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X2
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105049929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105049929
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105049929
mRNA degradation factors
5'-3' decay
Decapping complex
105049929
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_EML_2
Beta-prop_TEP1_C
DUF445
Motif
Other DBs
NCBI-GeneID:
105049929
NCBI-ProteinID:
XP_010928034
UniProt:
A0A6I9RK05
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All DBs
Position
8:complement(18018098..18047094)
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AA seq
1402 aa
AA seq
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MASPAGNPNPSSPFELHKLFKPLNPSPNSNPNASSPITPPSSYGVVPPSAYPPPSPGTFS
YPPTTPPFHHHPFLHYPQEPLHRPIVSYPAAPPHIPSPNSSPNPSPNPSPGANPGARLMA
LLGNTAPSHLESAVSMPPSSSMTSEFSAPVNPPILHAIPSAPPAVLAVVGQPAPARLPSS
KMPRGRHLGSGDRAMYDVDSRLPGESQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYICY
GLKLGAIRVLNINTALRSLLRGHTQRVTDMAFFAEDVHFLASASVDGRVFVWKIDEGPDE
ENKPQITGKIIIAIQIVGDGESYHPRICWHSHKQEILFVGIGNRVLKIDITKVGRGKEFS
AEEPLRCPIEKLIDGVHFVGKHDGEVTDLSISQWMTTRLASASKDGMVKIWEDRKAVPLT
TLRPHDGQAVNSVIFLTSPQRPDHINLITAGPLNREVKMWASAGDEGWLLPGDSEAWQCT
QTLDLRSSSEPRLEEAFFNQVMVLPRASLIVLANAKKNAIYAVHVDYGPYPAATHMDYIA
DFTVAMPILSLTGTNDCLPDGEQVVQVYCVQTQAIQQYALDLSQCLPPPSDNVALGKDPC
VSRVFDTPSLEGAAVSEPSRGPMVSDLPVGSPSPKCPTDNSTENSFIITSVASEVNIIHE
LSSSNVDVKPSAPPLPSSDADSANVVSSPVPLNLDLAGRLPPLRSPPKGFEQVPTLGDRD
VDPSNVDFSVDRRADTVITSTPDVPSMNENLGKDESKAGQNDISVVPNPRFMFNLGGNAT
HLVTPSEILSGAISSSDSSNVNQGPKDEEVKVPDVLVNNKLENVEVEVKVMGESRSSQNE
EFDSQKEAQVVPAESKEKSSQISEPNIEMANECSAVTETSNVEESHPVDDIAVAMSFEQH
PSTGEEEIQDSTKDMPEKVAESVGAAAPAAKGKKSKGKQSQASGLSSPSLSPFNSTDPSY
EPASSTGAPSAGAVFPQILAMQDMLNQLMTMQKEMQKQMSVIVAVPVTKEGKRVEAAVGR
SMEKAIKANTDALWARFQEENAKSEKLERERMQQITSLITNCMNKDWPAMLERALKKEIP
AVGQVIARAITPVIEKTISSAITDSFQRGVADKAVNQLEKSVNSKLEATVARQIQAQFQT
SGKQALQDSLKSSLESSVIPAFEQSCKAMFEQVDAAFRKGMTEHTTAAQQQLEASHTPLA
HTLRDAINSASTITQNLTTELIDGQRKLLALLAAGNTNSLNPIGMQPNNGPLAGLPEMVE
APLDPTKELTRLISERKYEEAFTMALQRSDVSIVSWLCSQVDLHAICSTVPLPLNQGVLL
ALLQQLACDISNETSRKVGWMTDVAVTINPTDPMITVHVRPIFEQVYNILAHQRSLPTTT
ASEATNIRLIMHVINSVLMSCK
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccctgctggaaaccccaacccctccagtcccttcgagctccacaagctcttc
aagcccctcaaccccagtccgaactctaaccctaacgcctcttcccccatcaccccgccc
tcctcctacggcgtcgtcccgccatcggcgtaccccccgccgtcccccggcaccttctcc
tacccccccaccaccccgccgttccatcaccatcctttcctccactacccccaggagccc
ctccaccgccccattgtctcctaccccgccgcccctccccacatccccagccccaactca
agccctaatcctagccctaaccctagccccggcgccaaccccggcgcccgtctgatggcg
cttctgggcaacaccgccccctcccacctcgaatccgcggtctcgatgcctccctcatcc
tctatgacgtcagaattctccgccccagttaacccgccgatcctccatgccattccttcc
gcgccgccggcggtcctggcggtggtcggccagccggcgccggcaaggctgccaagcagc
aagatgccgagaggaaggcacctggggagcggggaccgggcgatgtacgatgtcgactcg
cggctgccgggggagtcccagccgccccagcttgaggtcactccgatcaccaagtacacg
tcggatccggggcttgttttgggtcgccagatcgcggtcaaccgaacgtacatctgctat
gggctcaagctgggcgcgatccgcgtgcttaacatcaacacagcgctaagatcgctgctc
cggggacacactcagagggttacggacatggctttctttgctgaagatgtccactttcta
gccagtgcgagtgtagacgggagggtttttgtatggaagattgatgaaggacctgatgag
gaaaataagccacaaataacaggaaaaatcataattgccattcagattgtaggagatgga
gaatcatatcatccgcgaatttgttggcactctcacaaacaagaaattttatttgtcgga
attggaaatcgtgtgctaaaaattgacataacaaaggtgggaagaggaaaagaattttct
gcagaggaacctctccgatgcccaattgagaagctgattgatggagtgcattttgtgggc
aaacatgatggtgaagtgacggatttgtcaatatctcagtggatgacaactcgtttagct
tctgcatcaaaagacggcatggttaagatctgggaagatcgtaaagctgttccacttaca
actttaaggccacatgatggtcaagcagtcaattcagtcatattcttgacatcgcctcaa
agacctgatcacattaatctcatcacagcgggtccgctgaatagagaagtgaaaatgtgg
gcatctgctggtgatgaaggttggctgctgccaggtgattctgaagcatggcaatgcact
cagactttggacttgagaagttcttcagaacctcggcttgaggaggcattttttaaccaa
gttatggttttgcctcgagcaagcctaatagtacttgcaaatgctaaaaaaaatgctata
tatgcagttcatgtagactatggtccatatccagcagctacacacatggactatatagca
gactttactgttgcaatgcctattttgagtcttactgggacgaatgattgccttcctgat
ggggaacaggtggttcaagtttactgtgtccagacacaggctattcagcagtatgcattg
gatttatcacaatgtttgcctccgccaagtgataatgttgcattggggaaggatccttgt
gtctcacgtgtttttgacacacctagtttggagggggcagcagtttcagaaccttcccgt
ggacctatggttagtgatcttcctgtgggaagtccttcacccaaatgcccaactgataac
agcactgagaattcatttataataacctcagtagcttcagaggttaacattattcatgag
ctgtcctcatcgaatgttgatgtgaagcccagtgctcctccacttccaagttcagatgct
gattctgcaaatgttgtatcctcccctgttcccttgaatttggaccttgcaggaagacta
cctcccttgagaagccctccaaaaggttttgagcaggtaccaacacttggtgatcgtgat
gttgacccatcaaatgttgatttttcggttgataggagagcggacactgttatcacaagt
acacctgatgttccttccatgaatgagaacttaggaaaggatgaatctaaagctggccaa
aatgatatttctgtggtgccaaatcctcgttttatgtttaacctgggtggcaacgcaaca
cacctggtaactccatctgaaatcttatcaggtgctatatcttcatctgacagcagtaat
gtcaatcaaggtccaaaagatgaggaagtaaaggttccggatgtgcttgttaataataaa
ttggagaatgtagaggtggaagttaaagttatgggtgagagtagatcaagccagaatgag
gaatttgactctcaaaaagaggctcaagttgttcctgctgagagcaaggagaaatcctcc
caaatttcagaaccaaacattgagatggccaatgaatgttcggcagtaactgaaactagc
aatgtggaagaatctcaccctgttgatgacatagctgttgccatgtcatttgaacagcat
ccaagtactggtgaggaagaaattcaagacagcacaaaagatatgcctgaaaaggtggca
gaatctgttggtgctgcagcacctgccgccaaagggaagaaatcaaagggaaagcagtct
caagcttctggattatcatccccttccttgagtccttttaactccactgatccttcatat
gaaccagcaagcagtacaggcgctccttctgctggtgctgtgtttcctcaaattctggcc
atgcaggatatgctgaaccagcttatgaccatgcaaaaggaaatgcagaagcagatgagt
gtgatagtggctgttcctgtcaccaaagaaggcaaaagagtggaggcagctgtggggcgg
agcatggagaaagctatcaaggctaatactgatgctttgtgggcacgtttccaggaggaa
aatgcaaaaagtgagaagctagagagagaacgaatgcagcagataacaagtttgatcaca
aactgtatgaacaaggattggcctgccatgttggaaagggcattaaagaaggaaatccct
gcagtcgggcaagtcatagctcgtgcaattacaccagttattgagaagacaatttcttca
gcaataactgactcatttcagagaggggttgcagacaaagcagtaaatcagttggagaag
tccgtcaattcaaaacttgaagctacagtggctaggcagatccaagcacaattccaaact
tctgggaagcaagctcttcaggattcattaaaatcttctctagaatcctcagtgattcct
gcatttgagcagtcttgcaaagcaatgtttgaacaagtagatgctgcattcaggaaagga
atgactgaacatactactgcagcacagcaacaacttgaggcatcacatactccacttgct
cacactttgagggatgcaatcaattctgcatcaacaattacccaaaaccttaccactgaa
ttgattgatggccagcggaagcttttagctctccttgcagcaggaaacacgaattcattg
aatcccattggtatgcagccaaacaatggcccactggcaggtcttcctgagatggttgag
gcacctctggatccaacaaaagaactaacaagattaatatctgaacggaaatacgaggaa
gcattcactatggctcttcaaagaagtgacgtgtccattgtctcttggttatgttcgcag
gttgatttgcatgcaatttgttccacggtaccacttcctctaaatcaaggagtactgcta
gctcttctgcagcagctagcatgcgatatcagcaatgagacatcccgcaaagtgggatgg
atgacagatgtagctgtaactatcaatccaacagaccctatgatcacagtgcatgtacgg
ccgatatttgagcaggtctataacatattggcccaccaaagatcgcttcctacaaccaca
gcatctgaagctaccaacatccgactaataatgcatgttataaattcagtattaatgagc
tgtaaatga
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integrated database retrieval system
