Elaeis guineensis (African oil palm): 105050006
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Entry
105050006 CDS
T03921
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105050006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105050006
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105050006
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Zn_ribbon_LapB
ELL
DUF1258
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
105050006
NCBI-ProteinID:
XP_010928148
UniProt:
A0A6I9RLC1
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Position
8:16353799..16371673
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AA seq
537 aa
AA seq
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MSFDLVLKPSCEGCGSTSDLYGSNCKHTTLCRSCGKTMAENRGRCRMCGAFITKLIREYN
VRASANTDKAFYIGRFVTGLPPFSKKKNAENKWSLYKEGLQGRQLTDSLREKFKSKPWIL
EDETGQHQYQGQVEGSQSTTATYYLLMLHGKEFIAIPAGSWYNFTKIAQYKQLTLEEAEE
KMNKRKHNATGYERWMMKAATNGAAAFGELLKKSEGASSGGADGSRAKKGKSNDEGDHSD
KGEEDEEEEEARKNRLGLTKQGVDDEEEGGKGGDIDLDDDDIEKGDDWEHEETFTDDDEA
VGNDPEEREDLAPEIPAPPEIKQDDEDENEEDGGLSKSGKELKKLLGRAAGLNESDAEDD
DEDDDEDEVGMSPVLAPKQKDTPKDEPTDSSPSKPVPPPGSARGTPAASKSSKTKRKSEE
VKSSNGAPVKKVKTDNDSKSSGVKDEPPSSTKSSAPAKGSSSTAARTGPTSSVAPVTEEE
IRTVLLSVAPVTTQDLVARFKARLKSQEDKSAFADILRRISKIQKTNGHNYVVLREK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgatctggtgctcaagccgtcgtgcgaggggtgcgggtcgacctcggacctc
tacgggagcaattgcaagcacaccaccctctgccgctcctgcggcaagaccatggccgag
aaccgcggccgctgccgcatgtgcggcgccttcatcaccaaattgatcagggagtataat
gtccgggcaagcgccaatacagacaaagctttctatattggtagatttgtcacaggtttg
cctcctttttcaaagaagaagaatgcagagaataaatggtctctttacaaggaagggctt
caaggacggcagctcaccgacagtttgcgggagaagttcaagagcaaaccatggattttg
gaggatgagactggtcagcatcagtatcaaggtcaagttgagggttcacaatctactact
gcaacttactatctgttaatgttgcatggcaaggagttcattgctattcctgctggttct
tggtacaactttaccaaaattgcacagtacaagcaattaacactggaagaggctgaggag
aagatgaacaaaaggaagcataatgcaactggatatgaaagatggatgatgaaggcagca
actaatggagctgctgcttttggtgaattgttgaagaagagcgaaggtgcgagcagtggt
ggggctgatggcagtcgtgctaagaaaggaaaaagcaatgatgagggagatcactctgat
aagggtgaggaagatgaggaagaagaggaggcaaggaagaatagacttggacttaccaaa
caaggtgttgatgatgaagaagaaggtggaaaagggggcgacattgatctagatgatgat
gacatcgaaaaaggtgatgactgggagcatgaagaaactttcaccgatgatgatgaggct
gtgggcaatgatccagaggaacgagaagatttagctcctgaaattcctgctccgccagaa
attaagcaggatgatgaggatgaaaatgaagaagatggtggattgagtaaatctggaaaa
gagttaaagaaactgcttggacgagctgctggactaaatgaatcagatgctgaggatgat
gatgaagatgacgatgaagatgaggttggcatgtcacctgtgcttgctccaaaacaaaag
gatacacctaaggatgaacctactgatagcagtccatcaaaaccagtacctcctcctgga
tctgcccggggcacaccagctgcatccaaatcatcaaagacaaaaaggaaaagtgaggag
gtgaagtcttctaatggtgcacctgtgaagaaggtcaagacggataacgactcaaaatca
tcaggtgttaaggatgagcctccctcttccactaaatctagtgcgcctgcaaaaggatcc
agttccacagctgctagaactggaccaacatcttctgtggctccagttacggaggaggaa
attaggactgttcttctttcagtggctcccgtgactacacaggacttggttgctagattc
aaggccagactgaaatcgcaggaggataaatcagcttttgcagatattttaagaagaata
tcaaaaatacagaagaccaatggccacaattatgttgtgttgagagagaaatga
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