KEGG   Elaeis guineensis (African oil palm): 105050354
Entry
105050354         CDS       T03921                                 
Name
(RefSeq) small nuclear ribonucleoprotein E
  KO
K11097  small nuclear ribonucleoprotein E
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105050354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105050354
   03041 Spliceosome [BR:egu03041]
    105050354
   03032 DNA replication proteins [BR:egu03032]
    105050354
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     105050354
Spliceosome [BR:egu03041]
 Complex A
  U1 snRNP components
   Sm proteins
    105050354
  U2 snRNP components
    105050354
 Complex B
  U1 snRNP components
    105050354
  U4/U6.U5 tri-snRNP components
    105050354
 Complex C
  U2 snRNP components
    105050354
DNA replication proteins [BR:egu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     105050354
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 105050354
NCBI-ProteinID: XP_010928628
UniProt: A0A6I9RL31
LinkDB
Position
8:30492261..30507491
AA seq 151 aa
MSVCRHGCFFVKQLLYLKLESPPLTVPSSHLPRYLGFYQRSYRSPARAKREGEELAEAKE
EAAMASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQRDLRIEGRIIGFDEYMNLVLDDA
DELNVKKNTRKPLGRILLKGDNITLMMNTGK
NT seq 456 nt   +upstreamnt  +downstreamnt
atgtctgtatgtagacatgggtgttttttcgtgaaacaactattgtatttaaaactcgag
tcacctccccttacagtcccttcaagccacctcccccgctacctagggttttatcaacgt
tcctatcgatctcccgccagagccaagagagaaggggaagagctcgcggaagccaaagaa
gaggcagccatggcgtccaccaaggtccagaggatcatgacccaaccgattaatcttatc
ttcaggtttcttcaaagcaaagcacgcatccagatctggctgtttgagcaaagggatttg
aggatagaagggcggattataggttttgatgagtacatgaatttggtgctggatgatgct
gatgaactcaacgtcaagaaaaatactagaaagccattggggaggattctcttgaaagga
gacaacattactttgatgatgaacacgggaaaatga

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