Elaeis guineensis (African oil palm): 105050506
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Entry
105050506 CDS
T03921
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105050506
09123 Folding, sorting and degradation
03018 RNA degradation
105050506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105050506
03041 Spliceosome [BR:
egu03041
]
105050506
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105050506
mRNA degradation factors
5'-3' decay
Lsm complex
105050506
Spliceosome [BR:
egu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105050506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
105050506
NCBI-ProteinID:
XP_010928862
UniProt:
A0A6I9RMM2
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Position
8:6975557..6981465
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AA seq
99 aa
AA seq
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MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccggaaggaaactgttttggatttggcaaagtttgttgacaagggtgtccaa
gtcaagctaactggcggaaggcaagttacagggactctaaaaggatatgatcagctgcta
aatctagtgctggatgaagcaattgagtttctaagagatcctgatgatccactgaagact
acagatcagaccaggcgtcttggcctaatagtttgtaggggaactgcagtgatgctcgta
tcacctacggatggaaccgatgagattgcaaatccctttatgcagccagatggggcctaa
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