Elaeis guineensis (African oil palm): 105050714
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Entry
105050714 CDS
T03921
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105050714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105050714
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105050714
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105050714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
105050714
NCBI-ProteinID:
XP_010929136
UniProt:
A0A6I9RMA6
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Position
8:4178665..4179977
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AA seq
275 aa
AA seq
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MSSILPKNETVQIREVWNDNVDAEFALIREIVDDFPYVAMDTEFPGIVARPLGNFKTSSD
FNYATLKANVDMLKLIQLGLTFSDESGNLPTCGTGHGCVWQFNFREFDVHHDIFASDSIE
LLRQSGIDFKKNNERGIDTNRFGELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTCQNL
PDTQAGFFNLIKIYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT
SCTFRKLKESFFNGSTERYAGVLYGLGVENGQNTH
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccatcctgccgaagaatgagaccgtccagatccgggaggtgtggaacgataac
gtcgacgcggagttcgctctaattcgcgagattgttgatgatttcccgtatgttgccatg
gacactgagttcccgggcatcgtcgcccgccccctcggcaacttcaagacgagctccgac
ttcaactacgccaccctcaaggccaacgtcgacatgctgaagctgatccagctggggctc
accttctcggacgagtccggcaacctccctacctgcggcaccggccacggctgtgtttgg
cagttcaacttccgggagtttgacgtccaccatgatatatttgcatccgactccatcgag
ctcctccgccagagtggcatcgatttcaagaagaacaatgagaggggcatcgacaccaac
cgcttcggagagcttctcatgtcgtcgggcatcgtgctcaatgattctgtccactgggtc
acctttcatagtggttatgattttgggtaccttctcaagctgctcacttgtcagaacctt
cccgatacccaggccggcttctttaatctgatcaagatctacttcccgacggtctatgac
atcaaacacctgatgaagttctgcaacagcctccatggtgggctcaacaagctcgcggag
ctgctcgatgtcgagagggtcgggatctgccaccaggccggatcggacagcctgctcact
tcgtgcacatttaggaagttgaaggagtcgttcttcaacggctccactgagagatatgca
ggcgtgttgtatggtctgggtgttgagaatggacagaatactcattga
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