Elaeis guineensis (African oil palm): 105050755
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Entry
105050755 CDS
T03921
Name
(RefSeq) ubiquitin receptor RAD23b
KO
K10839
UV excision repair protein RAD23
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03420
Nucleotide excision repair
egu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105050755
09124 Replication and repair
03420 Nucleotide excision repair
105050755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
egu03051
]
105050755
03400 DNA repair and recombination proteins [BR:
egu03400
]
105050755
Proteasome [BR:
egu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105050755
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105050755
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
TECR_N
UBA_RAD5A
Ubiquitin_4
MCM_N
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
105050755
NCBI-ProteinID:
XP_010929193
UniProt:
A0A6I9RNB6
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Position
8:3338339..3353923
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AA seq
401 aa
AA seq
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MKLTVKTLKGSHFDIRVQPSDTIMAVKKIIEDVQGKDNYPWGQQLLIHNGKVLKDESTLE
ENKVSEDGFLVVMLSKSKTSGAPGASSTAQPSAPAPAPAPAPAPAPAPAPVPAPAPAPAP
APAPAPRPASSNPPAQAPASTNLASGTERATMEPADAYGQAASSLVSGSDIEPVVQQLMD
MGGGSWDKNTVLRALRAAYNNPERAVEYLYSGIPATAEVAVPVGNISSAQASGQGANTTE
TTTAQASPLSGVPNSAPLDMFPQGTPSLGAVAGDGSLDFLRHNRQFQGLRAMVQANPQIL
QPMLQELSKQNPQLLRLIQEHHAEFLQLINEPVEDLEGDLFDQPEQEMPHTVSVTPAEQE
AIARIEAMGFDRARVIEAFLACDRNEELAVNYLLEHAGDEE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttacggtgaaaacgttgaaggggagtcacttcgatatccgggttcagcccagc
gatacgataatggctgtgaaaaagattattgaggacgtacagggaaaagataactatcca
tgggggcagcaattgttgattcacaatgggaaggtcttgaaagatgaaagtacattggaa
gagaacaaagttagtgaagatggatttcttgttgtcatgctttctaagagcaaaacttca
ggtgcaccaggagcctcatctactgctcagccttcagctccagctccggctccggctccg
gctccggctccggctccggctccggctccggttccggctccagctccggctccggctccg
gctccggctccggctcctcgtcctgcttctagcaaccctcctgcacaagctccggcctca
accaaccttgcaagtggcactgaaagagcaacaatggagcctgctgatgcttatggtcaa
gctgcatccagcttagtttcagggagtgatattgagccagtggttcagcagttgatggat
atgggtggtgggagctgggacaaaaatactgttctgcgtgcacttcgtgctgcttacaac
aacccagagcgtgctgtggaatatttatattctggtattcctgctacagcagaagttgct
gttccagttggtaacatttcttcagctcaagcatctggtcagggggcaaacacgactgag
acaactacagctcaggcctcaccactatctggagtaccaaattctgcacctttagatatg
tttccacagggaactccaagtcttggtgcagttgctggggatggatctctggatttcctc
agacataatcgacagttccaaggattgcgtgcaatggttcaagcaaatccacaaatatta
cagcctatgcttcaagaactcagcaagcagaaccctcaacttctaaggctaatccaagag
catcatgctgagtttctccagttaataaatgagcctgttgaagatcttgagggggatctg
ttcgatcagcctgagcaggagatgccccataccgtcagcgttacgcctgctgagcaagag
gcaattgcacgaattgaagccatggggttcgatcgggcacgtgtcatagaagcattctta
gcttgtgacaggaatgaggagttggctgtaaattatttgctagaacatgcaggcgatgaa
gagtaa
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