Elaeis guineensis (African oil palm): 105050885
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Entry
105050885 CDS
T03921
Name
(RefSeq) nuclear pore complex protein NUP160
KO
K14303
nuclear pore complex protein Nup160
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105050885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105050885
03036 Chromosome and associated proteins [BR:
egu03036
]
105050885
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105050885
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105050885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
105050885
NCBI-ProteinID:
XP_010929399
UniProt:
A0A6I9RMN2
LinkDB
All DBs
Position
8:706124..738542
Genome browser
AA seq
1516 aa
AA seq
DB search
MAAASRSLAGMEVPIAGSEKVRWIEVTVPFSSPLSSPPQLPASQPSTPTASRNAASCHVI
HGDPPAYLVWRLHKNLPNVLEVVELFPHKEFPETGLHIVFQDALCPFAFVCKNEIQSRAG
NGYLLYTLTVSGVAYLFYLRSSLSYISGSTFPQNELVEFNVQTHAQIGNITAVTAAPGCM
IIGRQDGSIGCYQLGILDPSAPGFMNELRDDAGIGRLWNLVSRGKVVGPVQDMVISEICG
RKLLFVLHLDGILRVWDLVSRMKIIGHNVSSSELEGSNPSRLCVGDANQDTNLICLAILH
EGILVSDRQMVSLHHFGFSAGEKVSLSPEPAMQNIHLEEGKLIDLRLHFSKLWMLKEDGS
MLYDLSYFDCNVKHTGTYNLQEDSVADQLFQSSEHALDDLIWTNSSIFSSIKDRTAYFIS
SIFLRRLLQPGVYHSSALRATILEHKKYLSDHEFKSLTVAGLKKAIFTIIEGEGATMNSS
SAIYNWKSFCSHFFGHWCQSSMPYGLLLDSSNDVIGLIRKSSISLFRSLEGVEQLIYGSS
DEFQDLKCSTMILPDSNIDSEILFEALRCMSHINHQLGRAATAIFYESLVSPIVSSDDII
CQLLKILETGYNPSLATSLISQIGVDATWEKQQMAHKSQRKFAVEMLLSLHSLHTKAANW
SGVLDVIEKYLKYLTPHKSSQNFDSKGIYSISSSVLVLTTSQVARVMFESAFDVLLLLGY
LVNVSGQVYMMQTDVARIRLKLIPTIQEILMQWLILHFMAITPTTPPTVEDFSSRLSSLN
IDNKTDKRSLDGKLGSSDFTLACLLDFPCSSEGEDVLCSKSFPNPRKLIHLIQNFSSLVI
WGKTSEEFPLSSKPMLELASLLLRHGQYEAAENLFLIIDAHLRSRKASQNAQSTDGEWCA
RLHLLGYCLLVRAQGGLHGALKEQKIRESIRCFFRAASGQGAPQSLQNLSFETGLQYSGE
YGSIAIWRLHYYQWAMQLFEQYSVSEGACQFALAALEQVDVVLNLSDGNNDDDLLPEPAT
TIQGRLWANVFKFTLDMKQYGNAYCAIISNPDEDSKYICLRRFVIVLCELGEAKVLCDGK
LPFVGLTEKVEQELVWKAERSDISARPNLYKLLYAFEVHRNNWRKAASYMYRYSVRLKKE
ATLDGKHLVSSALQERLQTLAAAINALQLVDHAYAWIDSQYGDNFTHDQGSPSKKPRNVV
TANSASVDGAPQSWGLQYCVDIEMLEKEHMLASAQYLLALVNDKFKFSGTQALGNLVDVL
IQENIYDMAFTIIVKFWKGSGLKRELERAFVAISQKCCPNRAGSSVIGSNVKASNLLLPS
SEDDTYADGKLNASPVIHQFKGSGQWETLEIYLEKYRKLHPRLPVIVAETLLYTDPQIEL
PLWLVHMFKGGRRATSWGMTGQESDAATLFRLYVDYGRHAEATNLLLEYLESFASLRPAD
VVNRKKMSAIWFPYTAIERLWSQLEELQSAGHMVEQCDKLKRLLRGALMSHLKQVEVDSE
DALCAATGAETQNSSS
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcctctcgatccctcgctggcatggaggttcccatcgccggaagcgaaaag
gtccggtggatcgaggtcaccgtccctttctcctcccccttgtcgtctcctcctcagctc
cctgcgtcccagccctccacccctacggcctcccgaaacgccgcatcttgtcacgttatt
cacggagatcctccggcctacctcgtctggaggcttcataagaatcttccaaatgtcctt
gaggtggtcgagctttttccacataaagaatttcctgagactggattgcacattgtattt
caggatgcactctgtccctttgcttttgtatgcaaaaacgagattcagagcagagcagga
aatggatacttgctttatacgctgacagtttcaggagttgcttatcttttctacttgaga
agttcattatcttatatatctggttccacctttcctcagaatgagcttgtagagtttaat
gttcaaactcatgcacaaattggaaatattacagcggtaacagcagcgccaggatgcatg
ataattgggcgacaagatggatcaattggctgctaccaactgggaatactagatccaagt
gcaccaggtttcatgaatgagcttcgtgatgatgctgggattggtcgtttatggaatctt
gtgtcaaggggaaaggttgttgggcctgtgcaagatatggtgatatctgaaatttgtgga
agaaaattgctatttgttcttcatttggatggaatcttgcgtgtatgggatcttgttagt
cgcatgaagattattggtcataatgttagctcaagtgaactggaaggatctaatccctcc
aggttatgtgttggtgatgccaatcaagatacaaacctaatttgtttggcaattttacac
gagggcattttggtatctgataggcagatggtttctttgcatcattttggttttagcgct
ggagaaaaggtctctttatcgccagagcctgcaatgcagaatatccacttggaagaggga
aaacttattgacttgagactccatttcagcaaactctggatgcttaaggaagatggatca
atgctgtatgatctatcttattttgattgtaatgtgaaacacacaggtacttataatttg
caagaagactctgttgctgaccaactatttcaaagttctgaacatgctttagatgactta
atatggaccaacagttctattttttcatcaatcaaggatcgaactgcctattttatctca
tcaatatttttgcggagattactccaacctggagtgtatcatagttctgctctacgtgca
acaattttggagcataagaagtacctatctgaccatgaatttaagtctcttactgtggct
ggattgaaaaaagcgatttttacaattattgaaggcgagggagctactatgaattctagt
tcagccatttataactggaagagtttttgttcacatttctttggccactggtgtcaaagc
agtatgccatatgggttgcttctcgattcttcaaatgatgtaattggtttgatcaggaag
agctcaatttctctattccgttctttggaaggcgtcgaacagcttatttatggttcttct
gatgaatttcaagacctaaaatgttctacgatgattctgccagatagcaacattgattct
gaaatcctttttgaagcgcttagatgtatgagtcatatcaatcaccaattaggaagagct
gctactgctatattttatgaatctcttgtcagtcctattgtttcatctgatgatatcatt
tgccagttattgaagatactggaaactgggtacaatccatcattggcaacatctctaata
tcacaaattggagttgatgctacatgggagaagcagcagatggctcacaaaagtcaaaga
aagtttgcagttgagatgttgttgtctcttcatagtctgcatacaaaagctgctaactgg
tctggagttttagatgtcatagaaaaatacttgaagtatctgacgccacataaaagcagc
caaaattttgattccaaaggaatttatagtatcagctcttctgtattagttctaactacc
tcacaagttgcaagagtgatgtttgagtcagcttttgatgttcttctgcttcttgggtat
ctggtcaatgtcagtggacaggtgtatatgatgcaaactgatgttgctcgaataagactt
aagttaatcccaactattcaagaaatacttatgcaatggcttatcctccattttatggca
attactccaactactccaccaacagtggaggatttcagctctcgtctttcttcattaaat
atagataacaaaactgataaaagatctctggatggaaagcttggttcatctgattttacg
ttggcttgtttgctggatttcccatgctcctctgaaggcgaagatgttctttgttcaaaa
tcttttcctaatccgaggaagttaattcacttaattcaaaattttagcagtttggttata
tggggcaagactagtgaagaatttcctttatcctcaaaacctatgcttgagctagcatca
cttctacttcgccatggtcaatatgaagctgctgagaatctatttcttattattgatgct
cacttaaggagtagaaaggcatcccaaaatgctcaaagtactgatggtgaatggtgtgca
cgtcttcatcttctgggatattgccttcttgtacgggcacaaggtgggcttcatggagcc
cttaaagagcagaaaataagggaatctatccgctgttttttcagagctgcatctggacag
ggagcaccacaatctttgcaaaatctctcttttgaaactggcctccaatattctggagaa
tatggatctatagccatctggagacttcattattatcaatgggcaatgcagcttttcgag
caatatagtgtcagtgaaggggcttgtcagtttgctcttgctgctcttgagcaagtggat
gttgttcttaatttgagtgatggtaacaatgatgatgacctgcttcctgaacctgcaact
acaattcagggacggctatgggcgaatgtctttaaattcaccttagatatgaagcaatat
gggaatgcctattgtgccataatctcaaatccagatgaggatagcaaatacatatgcctg
aggcgttttgttattgttctttgtgaacttggtgaagctaaggttctttgtgatggtaag
ctgccatttgttggattaacagaaaaagtagagcaggagcttgtttggaaggctgaacgc
tctgatatttctgcaaggccaaatctatacaaactgctttatgcttttgaagtgcatcga
aacaactggagaaaggcagctagttacatgtaccgatactctgtgagattgaagaaagaa
gcaaccttggatggaaaacacctggtttcgtcagcattacaagagaggctacaaacattg
gctgctgcgatcaatgctctgcaacttgttgatcacgcttatgcttggattgactctcag
tatggtgataactttactcatgatcaaggttcaccaagtaaaaagcctagaaatgtcgtg
acagcaaattctgcttctgttgatggtgctcctcagtcttgggggctgcaatactgtgtt
gatattgaaatgctggaaaaggagcatatgctggcatcagcgcaatatctgcttgctctt
gtgaatgataagttcaagttttctggaacccaagcactaggaaatttggtggatgttctg
atccaggaaaatatatacgacatggcttttacgataatagtcaagttttggaagggttcg
ggactaaaaagggaattagaacgggcctttgttgctatctcacagaaatgctgtccaaat
agagcagggtcctctgttatagggagcaatgtgaaagccagcaatcttctgctgccatct
tctgaggatgacacgtatgctgatggaaaactaaatgctagtcctgtaattcatcaattc
aagggaagcggccagtgggaaacacttgaaatctaccttgagaaatacagaaagttgcat
ccaagattgccggtgattgttgctgaaacacttctatatactgatcctcagattgagctg
cctctttggttggttcatatgttcaagggtggacggagggcaacgtcctgggggatgaca
ggccaggaatcagatgcagcaaccttattcagactctatgtggactatggccgacatgct
gaagctacaaacttgttgctcgagtacctagaatcctttgcatctttgagaccagctgat
gtagtcaatcgaaaaaagatgtcggcgatttggtttccttacacagcaattgaacggttg
tggtcccagctcgaggagttgcaaagtgcaggccacatggttgagcaatgtgacaaacta
aaaagattgttgcgtggagctttgatgagccacctaaagcaggtggaggtggactcggag
gatgcgttatgcgctgcaactggagcagaaacacagaattccagcagctag
DBGET
integrated database retrieval system
