Elaeis guineensis (African oil palm): 105051054
Help
Entry
105051054 CDS
T03921
Name
(RefSeq) DNA excision repair protein CSB isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105051054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egu03036
]
105051054
03400 DNA repair and recombination proteins [BR:
egu03400
]
105051054
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105051054
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
105051054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
105051054
NCBI-ProteinID:
XP_010929630
UniProt:
A0A6I9RP64
LinkDB
All DBs
Position
9:94613528..94623369
Genome browser
AA seq
1234 aa
AA seq
DB search
MIFRSRPCACDNMDEEDEDKLLLSSLGITSVKPEDIERKILSEAKSDAKCGSQSEVCSEE
HELDGEPETGPSSTSRIKLYDKLRAVEVEIDAVASSIEAAKDVAYSENDHTGNADIKEDN
DRRNDDGSAQVTSNGLTLQQALATDRLRSLKKTKAQLQNEISKLDENATPEDFGHEKLLA
DLVEEKCKRKSKAVEQSNRDSKSHLKTVAYNEDADFDAVLDAASTGFVETERDELIRKGI
LTPFHKIKGFERRVQQPAPSNRHVPEESAAEDHASASIAKVAQLISDAAQNRPATKLLDT
VALSGLDAPTHPFQRLKAPLKHPVSPKGKELEKKTRKLRRTKRPLPSKKWRKVDSKEKLP
DGSDEDSMGDSIASDYGETQEENTDDGEQSPVILEGGLKIPASIYMNLFDYQKVGMKWLW
ELHCQRAGGIIGDEMGLGKTVQVISFLGALHFSKMYKPSIVVCPVTLLRQWQREARKWYP
DFRVEILHDSAHGLNKQTVAKSSESDYDSEDSLDSDNERPRPAKSVKRWNDLIDRVVQSE
SGLLLTTYEQLRILGEKLLDIEWGYAILDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAP
IQNKLSELWSLFDFVFPGKLGVLPVFETEFAVPITVGGYANATPLQVSTAYRCAVVLRDL
ITPYLLRRMKADVNAQLPKKTEHVLFCSLTSDQRSVYRAFLASSEVEQIFEGSRNSLYGI
DIMRKICNHPDLLEREHSALHPDYGNPERSGKMKVVAQVLRVWKEQEHRVLLFAQTQQML
DILENFLAASGYSYRRMDGLTPIKQRMALIDEFNNSSDVFIFILTTKVGGLGTNLTGADR
VIIYDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILK
NPQQRRFFKAKDMKDLFTLQDDREGGSTETSNIFSQLSEEVNVGVGNGYQDKQGSSAAST
APVVPAKETNSPGLGASSSNSKGKEIAGQRNGEIDEETNILKSLFDAHGIHSAMNHDAIL
NANDDDKMRLEEQASRVARRAAEALRESRRLRSRDSFSVPTWTGRSGAAGAPSSIRRKFG
STINTQMLGPSKPSEGSASRPPGLAAGASTGKALSSAELLARIRGTQERAVGDALEQDLD
LASSSNQRESIPENTVASKPSHRYMVVQPEILIRQLCTFIQQRGGQTDSASITQHFKDRI
QSKDLPLFKNLLKEIAALEKDAGGSRWVLKPEYQ
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgatctttcggtctcgcccatgtgcatgtgacaatatggatgaggaggatgaggacaaa
cttttgttgagtagtttgggcatcacatctgtgaagccagaagatattgaacgtaaaata
ttatcagaggcaaaaagtgatgctaagtgtggaagtcaatcagaggtctgctctgaggag
catgagcttgatggagagcctgaaactggtccatcatctaccagccgaattaaactttat
gataaattacgggcagtggaagttgaaattgatgctgtagcttctagcattgaagcggct
aaagatgttgcgtacagtgagaatgaccatacaggtaatgcagatattaaagaggataat
gataggagaaatgatgatggttctgctcaagttacatccaatggattaactctgcagcag
gcactagcaactgaccgtttaagaagcctcaagaaaacaaaggctcaacttcaaaatgaa
atctctaagcttgatgagaatgccactcctgaggactttggacatgagaagctacttgct
gacctggttgaagagaagtgcaagaggaaatcaaaagcagttgaacagtctaatagggat
tcaaaaagtcatttgaaaactgttgcttacaatgaagatgctgattttgatgcagtgctg
gatgcagcctcaactggatttgttgaaactgaaagggatgaattgatccgtaaaggaata
ttaactccatttcataagattaaaggctttgagcgtcgtgttcaacaacctgcaccatca
aataggcatgtgcctgaggaaagtgcagctgaagatcatgcttcagctagcatagctaaa
gttgctcaattaatatcagatgcggcacaaaatcgcccagcaaccaaattgcttgatact
gtggccttatctggacttgatgcaccaacccatccttttcaaagacttaaggcacccttg
aaacatccagtctctccaaaaggaaaggagttagagaagaagacacgaaagctgagaagg
acaaagagacctttacctagcaagaaatggagaaaggtagattcaaaggagaaactgcct
gatggaagtgatgaagattcaatgggagactcaattgcctcagattatggggagactcaa
gaagagaacacagatgatggggagcaatctcctgtaatccttgaaggaggattaaaaatt
cctgcttctatttatatgaacctttttgattatcaaaaagtggggatgaagtggctgtgg
gagctgcactgccaaagagctggtggcattataggagatgaaatgggtctgggcaagact
gtgcaggtgatatcgtttcttggtgctttacatttcagtaaaatgtataaacccagcatt
gttgtttgtccagttacccttctgcgacagtggcagcgggaagctcgaaaatggtaccct
gacttcagagttgagatattgcatgattctgcacatggtttaaataaacagacggtggca
aagtcaagtgaaagcgattatgatagcgaagattccctggattctgataatgaaagacct
cgccctgccaagtcggtaaagaggtggaatgatttgattgatcgtgttgtgcaatcagaa
tctgggttacttctcaccacatatgagcaactacgcattctaggggagaagttgctcgat
atagagtggggatatgccatattggatgagggtcaccgtataagaaatcctaatgctgaa
gtaactttagtttgtaaacagttacagacagttcaccgtataatcatgactggtgcacca
attcagaacaagctttcagaactttggtcccttttcgattttgtcttccctggaaagcta
ggtgttttacctgtatttgagacagaatttgctgttcctattacagttggcgggtatgct
aatgctacaccattgcaagtgtccacagcttacagatgtgcagttgtcttgcgtgacttg
ataacgccataccttcttaggcgtatgaaagctgatgtgaacgcccaacttcccaagaaa
actgagcatgtccttttctgtagcctaacttcagaccagcgatctgtttatagggcattc
cttgctagttctgaagtggagcaaatttttgagggcagtagaaactcactttatggaata
gatatcatgcgtaagatttgcaatcatcctgatcttttagaaagagaacactctgctctg
catccagactatgggaatccagagcggagtggaaaaatgaaagtggttgctcaagtactt
agggtctggaaggagcaagaacatcgtgttctactcttcgcacagactcaacaaatgcta
gacattttggaaaacttcctggctgcaagtgggtatagctatcggagaatggatggactt
actcctataaagcagaggatggcacttatagatgaatttaacaactcatctgatgtcttt
atttttatcctgactactaaagttgggggtttagggacaaacttaactggtgctgacagg
gttatcatatatgatcctgactggaatccttccacagatatgcaggcaagagaacgagct
tggcggatcgggcagaaacgggatgtaacggtttacaggttgatcacgcgtggaactata
gaggagaaggtgtatcataggcagatttacaaacatttcctgaccaataagatattgaag
aaccctcagcaaagaagattctttaaagccaaagacatgaaggatctcttcacgctgcaa
gatgatagagagggtggttctactgagacttcaaatatattcagccagttgtctgaagag
gtaaatgttggggttggcaatggctaccaagataaacaagggtcctctgcagcttccact
gctcctgttgtgccagctaaagaaacaaactctccagggcttggagcatctagctccaac
agcaaaggaaaagagattgccggtcagaggaatggtgaaatagatgaagaaacaaatata
ttgaagagtctttttgatgctcatgggattcatagtgcaatgaaccatgatgctattctg
aatgccaatgatgacgataagatgaggctggaggagcaagcttcccgagttgcacgaagg
gcagctgaagccttgcgtgaatcaagaaggctcagaagccgtgacagtttttctgttcca
acatggaccggaagatcaggtgctgctggggcaccatcatccatccgtaggaagtttggg
tctaccataaatactcaaatgcttggtccttcaaaaccatcagaagggtctgcaagtagg
cctcctggtttagcagctggagcttccactggtaaggcactgtcttcagctgaactcttg
gctagaatccgtggaactcaagaaagagcagttggcgatgcacttgagcaagatctagat
ttggcatctagttcgaatcagagagagagcattcctgaaaacactgtggcatcaaagcct
tcccataggtatatggtggtccaacctgagatcttgatccgccaactatgcaccttcata
cagcagaggggtgggcaaactgattctgctagcataacacagcacttcaaggacaggata
cagtcaaaagatttgcctctgtttaagaatcttctcaaggagatagctgcactagagaaa
gatgctggtggatctagatgggttttaaagccagaatatcagtag
DBGET
integrated database retrieval system
