Elaeis guineensis (African oil palm): 105051165
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Entry
105051165 CDS
T03921
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105051165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105051165
03036 Chromosome and associated proteins [BR:
egu03036
]
105051165
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105051165
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105051165
PBAF complex
105051165
GBAF(ncBAF) complex
105051165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Mesothelin
Motif
Other DBs
NCBI-GeneID:
105051165
NCBI-ProteinID:
XP_010929776
UniProt:
A0A6I9RXA1
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Position
9:6924544..6926851
Genome browser
AA seq
521 aa
AA seq
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MASNSNNQSRAIGGPPPLGNPGMASPAANQPSHLRPPSLPQASGGSPFQGLFQTPPQSQV
HSPFQVQLSSQTQNAMLAAVGASSPSFSTPGMSAAKRPPQKPPTRIPAPFPAVATPSFKS
AELTAAARRKKRKLPEKQLPDRVAALLPESALYTQLLEFEARVDAALSRKKIDIQEALKN
PPSMQRTLRIYVFNTFANQTRTIPEPKNAEPPSWSLKIIGRILEDGVDPDPVGGLPKPNP
MYPKFSSFFKRVTIALDSVLYPENPTIIWENSRSPAPHEGFEIKRKGDKEFTASIRLEMN
YNPEKFKLSPALMEVLGIEVDTRARIIAGIWQYVKAKKLQNPSDASYFTCDPPLKKVFGE
DKMKFAMVSQKISPHLSPPQPIHLEHKIRLSGNGAVGNACYDVLVDVPFPLQKEMSAFLA
NTEKHKEIEACDEVICASIKKIHEHRRRRAFFLGFSQSPVEFINTLIASQSRDLKLVAGE
ASRNAERERRSDFYNQPWVEDAVIRYLNRKPAGSNDAPGST
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaacagcaataaccaatcgagggcaatcgggggacctccccccctggggaac
cccggaatggcctcgccggcggccaaccagccctcccatctccgccctccttcgctgcct
caggcatcgggtggttcccctttccaaggcctcttccagaccccgccccagtctcaggtc
cactcaccgttccaggtccagctcagctcccagacccagaacgccatgctcgctgccgtc
ggagcctcctccccttccttctccaccccaggcatgtcggccgccaaaaggcccccgcag
aagccccccactcgcatcccggcgcctttccctgccgttgccactcctagcttcaagtct
gcggagctgaccgcggctgcccggaggaagaagcgcaagcttccggagaagcagctgccg
gaccgggttgctgccctcttgcctgaatccgccctctatacccagttgcttgaattcgaa
gcccgggttgatgcagccctttcaaggaagaagattgacatccaggaagccttaaaaaac
cctccttccatgcaaaggaccctcaggatttatgtcttcaatacctttgccaaccagacg
cgcacaattccggagccaaagaatgccgagcctccgtcgtggtcactcaagatcattggt
aggatactagaggatggcgtggatccagaccctgtcggtggactgcctaagcccaatcct
atgtaccccaagttctcgtctttctttaagagagtcaccattgctctggactcggtgctg
tacccggaaaacccgacaatcatatgggagaactcgcgctcgccagcaccacatgagggc
tttgagatcaagcggaagggagacaaggagttcactgccagtataagactggagatgaat
tataacccagagaagtttaaactatcgcctgcattgatggaggttcttggcattgaggtt
gatacacgagctagaattatagctgggatatggcagtatgtcaaggcgaagaagttgcag
aaccctagtgatgcatcgtattttacttgtgacccacctttgaagaaggtgtttggagaa
gacaagatgaagtttgccatggtgtcacagaagatctcgccgcatttgtctcctccacaa
ccaatccatttagaacataagatcaggctttcaggaaatggtgcagtgggcaatgcttgc
tatgacgtgctggtcgacgttcctttcccactgcagaaagaaatgtcagccttccttgcc
aatacagagaaacacaaagaaattgaggcctgtgatgaagttatttgtgcttctattaag
aaaattcatgagcaccgcaggaggagggcattctttcttgggttcagtcagtctccagtg
gagtttataaacactttgattgcttctcagagtagggacttgaagcttgttgctggggaa
gcaagtcgtaatgctgaaagggaacgtcgttctgacttctataaccaaccatgggttgaa
gatgctgtcatacgttatcttaatcgcaagccagcaggcagcaatgatgctcctggtagc
acatga
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