Elaeis guineensis (African oil palm): 105051220
Help
Entry
105051220 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: fanconi-associated nuclease 1 homolog
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105051220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105051220
Enzymes [BR:
egu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
105051220
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
105051220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
HIRAN
Sgf11
Motif
Other DBs
NCBI-GeneID:
105051220
NCBI-ProteinID:
XP_019708405
UniProt:
A0A6J0PMR3
LinkDB
All DBs
Position
9:45794302..45914174
Genome browser
AA seq
972 aa
AA seq
DB search
MLHGRESLVRLIGKRRRTFSSPLARHLRPQNPSGTPLEYKKSSATSRPFPSSVEEESPPP
KQGDEIDGTEWVSCPVCGRSIHGTGYGVNSHLDTCLARGMKRKLTQSTLLQFKFCPRSKS
ESSLGDLENDKEKARKRASPKESDPSNSPSLSRYGLTGISERTPCASDSPYHSLSSSKIC
TDASLEGLEIVDAVISKVEDPLYSDMFPQNVKTQMPKLGICGPGDANSVITLETFIVGRR
FHGNAELWQGASIFILRDPQNPKDKHAIKVLSADFDGRVLGYLPRELAKYLSPLIDNHHI
KCEGSVTSLPRHPYDVIPIQLVCQMAENGDMKSDDCQILKSLWESVLLAIEYGKANPPSM
TKYQXNFCLMIEDVMNHYAYLFTDKEKSFLGAFNSLSDNGQRLFIRLYNRKGPWFRTSNI
SYPEISDPLQAVEELQLAGYLYLFNSYEDPFTYDMKEVLDLLNVYEIREILKQEPPKKVI
NCTRRQELINVLYSAYENGTCPLLPKVVFERVGTCVRISSAADILLWRVQRLFFLNGEQD
LSSFLLVDLGLIKFPDYTCNVSHQIFAGRDDLLEYEEAIEVAQVTDEYLDENNMDMVMRC
IDISDSQIRTSLTEDTRSSIPDSPPTFFSCFSASWVYSKVLTLGISVFEREHRYEDAIRL
LKGLLNRITHDNRRGYWTLRLSVDLEHIGRLNESLSVAEEGILDSWVRAGSKLALQRRVL
RLGKPPRHWKMPSYTDSVKRKIKEVNIPGRPLVCETGTKNLFYGYDGELCEVEKLALQYY
AGEGGGWLGVHSESGIWMTLFGILMWDVIFSNIPDVFRSRFQTAPLDLDTDDFYVARESL
VESHLQKIHRGMAEEILITSWDLHFGTACRGVNWERHSLSDLRAAVSCIGGRCLASLFRH
LSLDYTSWSSGMPDLLLWRFHGGDMGWGEAKLVEVKGPRDRLSEQQRAWMLILLDCGFDA
EICKVSPNPRSQ
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgctccacggccgagagagcctagtccggctcattggaaagcggcggcggaccttctcc
tcccctctcgcccgacatcttcgcccacagaatccttctggtactcctttggaatacaag
aagagttctgcgacgagccggcctttcccatcttcggtggaagaggaatcaccacctccg
aaacaaggggacgaaatcgacggcacagagtgggtttcatgccccgtttgcggtaggtct
attcacgggacgggttacggtgtgaattctcatctggacacatgcctagccagaggaatg
aaacgaaagttgacccaaagcacccttcttcagttcaagttttgcccaagatctaaaagt
gaatctagtttgggtgatttagaaaatgataaggagaaggcaaggaaaagggcatcacct
aaggaaagtgatcctagtaattctccttcactgtctagatatggtttgactggaattagt
gaaaggacgccgtgtgcatcagactctccatatcattctctcagtagttcaaaaatctgt
actgatgcttccctagaaggcttagaaattgtagatgctgtcatttctaaagtggaagat
cctctttactccgatatgtttcctcaaaatgtgaagacacagatgcctaagcttggtata
tgtggacctggagatgctaattctgtaattacgcttgaaacttttatagttggtcgtaga
ttccacggcaatgctgagttgtggcaaggtgcaagcatattcattttgagagaccctcaa
aatcccaaggataagcatgctatcaaggtgctttctgctgattttgatggaagggtgctt
ggatatttgcctcgagaattggccaagtatctgtctcctctaattgataatcaccatatc
aagtgtgagggatctgtcacatctcttccaagacatccttatgatgttatccctattcag
ctggtttgtcaaatggcagaaaatggtgatatgaagtctgatgattgccagatattaaag
tctttatgggaaagtgtcctccttgctattgaatatggaaaagcaaatcctcctagcatg
acaaagtaccagncaaatttttgtttgatgattgaagatgttatgaaccattatgcttac
ctttttactgataaagaaaaatcatttctaggagcttttaactcattatctgataatggt
caaaggctatttattcggctctataatagaaaaggaccatggtttcgaacgagcaatatt
tcctaccctgagatatccgatccactgcaagcagttgaggaattacaattggctggttac
ctctatttgtttaattcatatgaggatccgttcacatatgatatgaaagaagttcttgat
ttgctgaatgtttatgagatacgagaaattttaaaacaggagcctcctaagaaagtcatc
aattgcactcgacgacaggagcttatcaacgttctgtattctgcatatgaaaatggaact
tgcccactgttaccaaaggtggtttttgaacgggtgggaacctgtgtgagaatatcttct
gctgctgatatacttctgtggcgtgttcagagactctttttcctcaatggggagcaggac
ctttcatcttttctattagttgatcttggactgatcaaatttccagattacacttgcaat
gtttcacaccaaatttttgcaggtcgagatgaccttctagaatacgaagaggcgattgaa
gtggcacaagtaacagatgaatatctagatgaaaacaatatggatatggtgatgaggtgc
attgatatatctgatagccagatacgaactagtttaacggaagatactcggtcctcaatt
cctgactccccgccaacattcttttcatgtttctcggcttcatgggtctactcaaaagtg
ctcactttgggtatttctgtttttgagcgtgagcataggtatgaagatgcaatacgtctt
ttgaagggtttattgaacagaattactcatgataatagaaggggttattggaccttgagg
ctttctgttgatctggaacatattggtcgtcttaatgaaagtctttcagttgctgaagaa
gggatactggattcttgggttcgtgctggttcaaaactggcactgcaaagacgggtactg
cgcttaggcaaaccaccaaggcactggaagatgcctagttatactgattctgttaagcgg
aagatcaaagaagtcaacattccgggaagacctttggtatgtgaaacaggaacaaaaaat
ttattctatggttatgatggtgagctgtgtgaagtagagaagctcgccctgcaatattat
gctggtgaaggaggagggtggctaggtgtccattctgaaagtggaatttggatgactctc
tttggcattctcatgtgggatgttattttctccaacattcccgatgttttccggtccaga
tttcagacagctccactagaccttgatacggatgacttttatgtggcaagagagagtctt
gtagaatctcacttacaaaagatacatcgtggtatggctgaagagatcctgataacttca
tgggacttgcattttggaacagcttgtcgtggtgtcaactgggagagacattctctatct
gacctacgagctgctgtctcatgcattggaggccgctgtttggcttctctcttccggcat
ctctcactagattacacgagttggtccagtggcatgccagacctgttgctctggcgcttt
catggaggggatatgggctggggtgaagcaaagcttgtggaagtgaaaggcccaagagac
cggctttcagaacaacagcgagcatggatgctgatcctcttggattgtggttttgatgct
gaaatttgcaaagtaagcccaaatcctagatcccaatga
DBGET
integrated database retrieval system
