Elaeis guineensis (African oil palm): 105051292
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Entry
105051292 CDS
T03921
Name
(RefSeq) autophagy-related protein 16 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
105051292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egu04131
]
105051292
03029 Mitochondrial biogenesis [BR:
egu03029
]
105051292
Membrane trafficking [BR:
egu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
105051292
Others
Specific organelles associated proteins
Auto phagosome
105051292
Mitochondrial biogenesis [BR:
egu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105051292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
ATG16
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_HPS5
WDR54
Beta-prop_VPS8
Beta-prop_IFT122_1st
PEP5_VPS11_N
PQQ_2
Cytochrom_D1
Beta-prop_Nup120_160
Beta-prop_RIG_1st
YLR146W-A
Motif
Other DBs
NCBI-GeneID:
105051292
NCBI-ProteinID:
XP_010929949
UniProt:
A0A6I9RXK7
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All DBs
Position
9:complement(22621824..22631556)
Genome browser
AA seq
511 aa
AA seq
DB search
MSRSSEEIERAAIKRAIKALRKRHLVEEGAHAPAIAALARPLVVQGLEWKEKAENLELEL
QQCYRAQSRLSEQLVVEVAECRNSKALVQEKEELVSNLQDENTQLRDENSQLKKDLEEKT
KALDLLISENKSVKAQLEEVMLKLKDAEAENRKLIDRWMLEKMKDAEKLNEANAMYEDMM
ERFKVSSIEQLARQQVDGVIRRREAGYVEFGESAVPSVCKHTIHAHDGGCGSILFENNSD
RLISGGQDRTVKIWDTKTGNPSSTLHGCLGSVLDLAVTHDNRSVIAASSSNNMYVWDVSS
GRIRHTLTGHTDKVCTVDASKVSSRNVVSAAYDHTIKIWDLQKGYCINTIISMSNCNALS
YNMDGLTICSGHVDGNLRLWDSRTGKLISEVAAHSQAVTSICVSRSGNLVLTSGRDNLHN
LFDVRTLEVCGTFRANGNRVASNWSRSCISADENCVAAGSADGSIYVWSRLKADMPSILE
GHSSPVLTCSWSGLGKPLASADRNGNVCIWI
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggagctcggaggaaatagaaagggccgcaatcaagcgcgccatcaaagctctt
cggaagcggcatttggtcgaggagggcgcacacgcgccggccatcgccgccctcgccaga
cccctagtcgtccagggcttagagtggaaggaaaaagctgaaaaccttgaattagaactg
caacaatgttacagagctcaatctcggttgtctgaacaacttgtggttgaagtagcagag
tgcaggaactcaaaagctcttgttcaagagaaggaagaactagtatctaacctgcaagat
gaaaatacacaattaagggatgaaaactcacagcttaagaaggatttagaagaaaagaca
aaagctttggatctattaataagtgagaacaagtcagttaaagcgcaacttgaagaggtg
atgctcaaattaaaagatgcagaggctgaaaacaggaaattgatcgatcgttggatgttg
gagaagatgaaggatgcagaaaagcttaatgaggctaatgccatgtatgaggacatgatg
gaacgttttaaggtgtccagcatagaacaacttgcaagacaacaagttgatggagtaatt
cgccgaagggaagcaggatatgtggaatttggggagtcagccgttccttctgtgtgcaag
cataccatccatgctcatgacggtggatgtgggtccatattgtttgagaacaactcagat
aggctgatcagcggtgggcaggaccgaacagtcaaaatatgggacacaaaaactgggaac
ccgagttccacccttcatggttgcctcgggtcggtacttgatcttgctgttacccatgac
aacaggtctgtaatcgctgccagcagctccaataacatgtatgtatgggatgtaagttcg
ggccgtatacgccacaccctaacgggccacactgataaagtatgcactgtggatgcgagc
aaagtctccagccgcaatgttgtgagtgctgcttatgatcataccattaaaatctgggac
ctccagaaaggctactgcatcaataccatcatctcaatgagcaactgcaatgccctttcc
tacaacatggatggattgaccatttgttcaggtcatgtagatggtaatcttcgactgtgg
gatagccgaacagggaagctaataagtgaggtagctgctcattcacaggcagtcacatct
atctgtgtttctcgaagtggtaatctggtgctaacgagtggaagggacaacttgcataat
ctgttcgatgttagaacattggaagtgtgcgggacattcagagccaatgggaacagggtg
gcatccaactggagtcgatcatgcattagtgctgatgagaactgtgttgcagcagggtcg
gcagatgggtccatctatgtatggtcgagattaaaggctgatatgccaagcattctggaa
gggcactcttcgcctgttcttacatgctcatggagtgggttggggaaacctctagcctcg
gctgataggaatggaaacgtgtgtatatggatatga
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integrated database retrieval system
