Elaeis guineensis (African oil palm): 105051305
Help
Entry
105051305 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu00040
Pentose and glucuronate interconversions
egu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105051305
Enzymes [BR:
egu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105051305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
NosD
Motif
Other DBs
NCBI-GeneID:
105051305
NCBI-ProteinID:
XP_010929962
UniProt:
A0A6I9RPT0
LinkDB
All DBs
Position
9:21112337..21116013
Genome browser
AA seq
409 aa
AA seq
DB search
MATLPFTLLFLFSLLTIPISSSPTPKPSAAVQDPEFVVREVHRSLNNSRRRLGYLSCGTG
NPIDDCWRCDQNWESNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRY
AVIQDEPLWIIFQRDMVIKLKEELIMNSYKTLDGRGASVHIAGGPCITIQYVDHIIIHGV
HIHDCKQXGNAYVRDSPEHYGWRTVSDGDGVSIFGGSHVWVDHCTLSSCHDGLVDAIHGS
TAITISNNYMTHHDKVMLLGHSDSLMVDKNMQVTIAFNHFGEGXIQRMPRCRHGYFHVVN
NDYTHWEMYAIGGSAAPTINSQGNRFLAPDDRFAKEVTKREDASESQWKNWNWRSEGDLM
LNGAFFTPSGAGASSSYAKASSLGARPSSLVSSITMSAGALVCKKGSRC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggccactctaccattcactctcctcttccttttctcactcctcaccatccccatttcc
tcctcccccacacccaaaccatcagcagcagttcaagatccagaatttgtagtccgagaa
gtgcacaggagcttgaacaattctcgccggcggctgggctacctgtcatgcggcaccggc
aacccgatcgacgactgctggcggtgcgaccagaattgggagagcaaccgccagcgcctc
gccgactgcgccatcgggttcggcaagaacgccatcggcggccgtgacggcaaaatctac
gtcgtcaccgacagcggcgacgacgacccggtcaacccgaagcccggaaccttgcggtac
gccgtcatccaagacgagcccctctggatcatcttccagcgtgacatggtgatcaagctc
aaggaggagctgatcatgaactcctacaagaccctcgacggccgcggcgccagcgtgcac
atcgccggcgggccatgcatcaccatccagtacgtggaccacatcatcatccacggcgtc
cacatccacgactgcaagcagngggggaatgcctacgtccgggactcgcccgagcactac
gggtggcgcacggtgtcggacggcgacggcgtgtccatcttcggaggcagccacgtatgg
gtcgaccactgcacgctgtcgagctgccacgacggcctcgtcgacgcgatccatggctcg
acggcgatcacgatatcgaacaactacatgactcaccatgacaaggtgatgctcttgggg
catagtgatagcctgatggtggacaagaacatgcaggtcaccattgccttcaaccacttt
ggggagggcntcattcagaggatgccgaggtgtcggcatgggtatttccatgtggtgaat
aacgactatacgcactgggagatgtacgccattggagggagcgcggcccccactataaac
agccaagggaataggttcttggcaccagatgaccggttcgccaaagaggtgaccaagcgt
gaggatgcttcagagagtcagtggaagaactggaactggagatcagaaggggacctaatg
ttaaatggtgccttcttcacaccctccggtgccggagcctcatcgagctacgccaaggcc
tcaagcttaggggcaaggccatcctctctggtgagctcgatcacaatgtcggccggcgca
cttgtctgcaagaagggctcgcgttgttga
DBGET
integrated database retrieval system
