KEGG   Elaeis guineensis (African oil palm): 105051377
Entry
105051377         CDS       T03921                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03020  RNA polymerase
egu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105051377
  09124 Replication and repair
   03420 Nucleotide excision repair
    105051377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:egu03021]
    105051377
   03400 DNA repair and recombination proteins [BR:egu03400]
    105051377
Transcription machinery [BR:egu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     105051377
  RNA polymerase III system
   RNA polymerase III
     105051377
  RNA polymerase I system
   RNA polymerase I
     105051377
DNA repair and recombination proteins [BR:egu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105051377
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat NucS_C NA-iREase1 OB_RNR_1st
Other DBs
NCBI-GeneID: 105051377
NCBI-ProteinID: XP_010930084
UniProt: B3TLL2
LinkDB
Position
9:18568893..18589364
AA seq 204 aa
MSEDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKN
DPADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSLAEVSQKYM
LEVFQDTELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPIARYYGLK
RGQVVKIIRPSETAGRYVTYRYVV
NT seq 615 nt   +upstreamnt  +downstreamnt
atgtctgaagatgatatcagcaggctatttcggatacgaaggacggtgatgcagatgctg
agggaccgtggttaccttgttcttgaccttgaaattaacatgaacaagctccagttcctg
gagaagtttggtgaaggtgtgaagcgggaggacctggttatcaacaaagccaagaagaat
gatcctgctgatcagatttatgttttctttccaaatgatgcaaaagtaggcgttaaacaa
ataaagcaatatgttgagcggatgaaagcagagaatgtcactagaggaatattagttgtt
cagcaagctctgactccatttgcaaggcaatcactggcagaagtgtctcagaagtatatg
ttggaggttttccaggatactgagcttttggtcaacattaaggagcatgtacttgttcct
gagcatcaggtgctgacgtctgaggaaaagaaaacgttattggagcgttatactctaaaa
gaaactcagctacctcgaattcaagttactgacccgatagccagatactatgggctgaag
cgtggacaagtggtcaagatcatccgacccagtgagactgcaggcagatatgtgacatat
cgatatgtcgtgtga

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