Elaeis guineensis (African oil palm): 105051819
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Entry
105051819 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105051819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105051819
Enzymes [BR:
egu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
105051819
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105051819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
105051819
NCBI-ProteinID:
XP_010930741
UniProt:
A0A6I9RQE8
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Position
9:complement(7781814..7786820)
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AA seq
419 aa
AA seq
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MTSQPFFPSLSLFRARTPLAGAMTKRRRVKPRQPLPASTPSPPPPPTPPKKNPIANPNPK
PAAFRTKTRRSLAPSLLPSAAAGEWKTLPIPRSEFSLLLTLPTGQTFRWRRTAADCFTGV
VGSHLLSLKHLEGDPAGHVAFLLHCPSSTSAAARSALADYLNLGVSLADLWEGFAQADTR
FAELARRFGGGARVLRQDPVECVFQFLCSSNNNIGRIERMVGVLSSFGXYLGTVGGFDFH
EFPSLDRLSLVSEQELREAGFGYRAKYIVGTVKALQAKPGGGTEWLASLRGLELHEVIDA
LCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIAVQYLMPELAGMSLTPKLSNRVAEA
FVARFGKYAGWAQNVLFIGELSSQKALRPSDVTVSSQPRSAKRKHKKNKVATDISSQVG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacagccgttcttcccttctctttccctcttccgagcccgaaccccgctcgcc
ggagccatgaccaagcggcggcgggtaaaacctcggcagccgctgccggcctctactcct
tctcctcctccgccgcctacaccaccaaagaaaaacccgatcgctaaccctaatcctaag
cccgcagccttccggaccaaaacccggcggtccctcgccccctctctcctcccttccgca
gccgccggcgaatggaagacccttcccatcccccgctccgagttctccctcctcctcacc
cttcccactggccagaccttccggtggcggcggaccgctgccgactgctttaccggcgtc
gttgggtcccacctcctctccctcaagcacctcgaaggcgaccccgccggccacgtcgcc
ttccttctccactgcccctcctccacctccgctgccgcccgctccgccctcgcggactac
ctcaatctcggcgtctctctcgctgacctctgggaaggcttcgcccaggccgatacccgc
tttgccgagcttgcccggcggttcggcggtggcgctcgcgtcctacggcaggacccggtg
gagtgcgtcttccagttcctctgctcctcaaataacaacattgggaggatcgagaggatg
gtcggcgtgctttcatcgttcgggnagtatctcgggactgtcggtgggttcgacttccat
gagttcccgtcgctcgacaggctgtccctcgtctcggaacaggagctccgcgaggctggc
tttggttacagggcaaagtacatagttggtacagtcaaggctttgcaggcgaagcctggt
ggaggcactgaatggcttgcttctcttcgtggcttggagcttcatgaggtaattgatgcc
ctttgtactttgcctggagttggaccaaaggttgctgcctgtattgcacttttttccctt
gatcagcaccatgccattcctgttgatactcatgtgtggcagattgcagtgcaatatctc
atgccagagcttgcaggcatgagcctcacgccgaagcttagcaatcgtgtggctgaggca
tttgtggccagatttgggaaatatgctggttgggcacaaaatgtgctcttcataggtgaa
ctatcatcacagaaggccctcaggccatcagatgttactgtcagcagccagccaaggtct
gctaagagaaaacacaagaaaaacaaagtggctacagacatatcctctcaggttggataa
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