Elaeis guineensis (African oil palm): 105051879
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Entry
105051879 CDS
T03921
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
egu03012
]
105051879
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105051879
Translation factors [BR:
egu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105051879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
Helicase_C
HA2_C
DEAD
DND1_DSRM
HA2_N
dsrm
DSRM_DHX29
nSTAND3
AAA_22
ATPase
AAA_19
Motif
Other DBs
NCBI-GeneID:
105051879
NCBI-ProteinID:
XP_019708449
UniProt:
A0A6J0PMT9
LinkDB
All DBs
Position
9:6464714..6525477
Genome browser
AA seq
1451 aa
AA seq
DB search
MPPKRRQQQKAKAKSDAKPAPKLQISADNERRLRRLLLNTERPAPPPAAAPAPADTASRA
QKAKRLRSIYDKLSLEGFSSDQIEQALSALKEGATFETALDWLCFNIPGNELPLKFSSGV
SSSTHEGAERSVKIISTARDDWVPQQRLPDETKKGMPGVSIVIKAQRSEESLDLGKSSHK
DWIRQYMEQQEDKEQQEDEEQQKQEDDPNSRAASIAKEYHHAMLGAVEAKRKGDKKSQDQ
FGKIISKLKQELSILGLSHDILMSGPQDGFSYRSSEEISCDSTTWVSNDSKTQDSAGDQV
DFAADESKQIVNTNISESFSLKEIKHASGHRDKAVSEDGESNEEQELELDNLFSEDLSSG
AALPTEFMTQQKNDKLPQFIYGHSLGNIDEIWKKGDPGRIPKAILQKLCQKLGWEPPKYG
KLSEKGDKFLYSVSVLRTATGRGKSRKAGGLITIQPPNLDEAFGFVEDAQNKVAAFALCQ
LFPDLPLSQMLREPYSSFVSKWQKDELSTKLEDSEDIRRAGFVDSLLNVDTSQPMISMDS
NILSDGENMIEPQKLEGACDDPSGKGMDSTEEAASIYLQKELESKMKLPKYMKMLEARAA
LPIAKLKDNFLHLLKDNDVIVVCGETGCGKTTQVPQFILDDMINSGLGGCCNIVCTQPRR
LAAISVAERVSDERCESSPGSNDSLVGYQVRLDSARNEKTRLLFCTTGILLRKLAGNKDL
AGITHVIVDEVHERSLLGDFLLIVLKDLIGRQASHRRQKLKVVLMSATVDSSLFSRYFGD
CPVITAEGRTHPVSTYFLEDVYEKLEYHLPSDSPASGTFLMPNKGKPGSSSVDNRRGKKN
LVLSSWGDESLLFEDYVNPCYIPDFFECYSEQTRQNLKRLNEDVIDFDVLEDLISYIDEN
YPPGAILVFLPGVAEIDLLVDKLTASFRFGGVSSDWVLPLHSSLASTDQRKVFVSPPQNI
RKVIVATDIAETSITIDDVVYVVDTGRHKENRYNPHKKMSSIVEDWISWANAKQRRGRAG
RVKPGICFCLYTRYRFEKLMRPFQVPEMLRMPLTELCLQIKSLSLGDIKSFLLKAIETPR
EDVISSAIDLLYKVGAFQGDEVLSPLGYHLAKLPVDVLIGKMMLYGAVFGCLSPILSIAA
FLSYKFPFVYPKDEKQYVERAKSALLSESLDNILASNEENKESDHLLMVVAYNKWARILR
ENGAKAAQRFCRSYFLNSSVMYMIRDMRIQFGSLLADIGLINLPKLTMSDGRRKDKLDSW
FADMSQPFNMYACHSSVIKSIVCAGLYPNVAATREGIVGASLSDSKAPYSSPAVKDRPIW
SDGRREVHIHPSSVNHNAKGFQYPFLAFLEKVETSKVFLRDTTIISPYSILLFGGSMVIQ
HQTGLVIIDGWLKLTAPAQIAVLFKELRVTLHAVLKELISKPERATFVNNEVVKSIVHLL
LEEDKAQQSLH
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaagaggaggcagcagcaaaaggcgaaagccaaatcggacgcgaaacccgct
ccgaagctccagatatcggcggataacgagcgccgcctccgccgcctgctcctgaatacc
gagaggccggcaccgccgccggcggcggcccccgcccctgctgacaccgcttcgagagct
cagaaggcgaagaggctccgaagcatctacgacaagctctcgctcgaaggcttctcttcc
gatcaaatcgaacaggctctctctgctctcaaggagggtgcaacgtttgagactgctcta
gactggttatgctttaatattcctggaaatgagcttcctctgaagttttcaagtggggtt
tcttcatctactcacgaaggggcagaacgatcagttaaaatcatatctacagctcgggat
gattgggttcctcagcaacgtctaccagatgaaacaaaaaaaggcatgcctggagtttct
attgtaattaaagcacaacgtagtgaggagtctctagatctgggaaaatcatcacataag
gactggatacgacaatacatggaacaacaggaagacaaggaacaacaggaagatgaggaa
cagcagaaacaggaggatgatccgaactctcgtgctgcttccattgctaaagaataccat
catgcaatgttgggagctgtagaagctaaacggaaaggagacaagaaaagtcaggaccag
tttgggaagattatcagcaaactcaagcaggaattatctatactaggactatcccatgac
attttgatgtcagggccgcaggatgggttttcttatagatcttcagaggaaatatcatgt
gattccacaacctgggtatccaatgattcaaaaacacaagatagtgcaggtgatcaagta
gattttgctgcagatgaaagcaaacaaatagtcaatacaaatataagtgaaagctttagt
ttgaaggaaattaagcatgccagtggtcatcgggataaagctgttagtgaggatggtgaa
agcaacgaggaacaggagttagaacttgataatctattttccgaagatttgtcttctggt
gcagcattacccacagaattcatgacacaacagaagaatgataaattgccacaatttata
tatgggcatagtttagggaatattgatgaaatatggaagaagggagacccaggaagaatc
cctaaggccattctgcaaaagttgtgccagaaactaggttgggaaccacccaaatacggt
aaattatctgaaaaaggcgacaagttcctatattctgttagtgtattgcgtacagcaacc
ggccgaggtaagagccggaaggctggaggtttgattaccatccaaccacccaatctggat
gaagcctttggttttgttgaggatgcacagaataaagtagcagcttttgccctttgccaa
ctttttccggatcttccactttcccaaatgcttagagaaccatactcttcatttgtttca
aaatggcagaaagatgaactctcaaccaaactggaagatagcgaggatattcgtagagca
ggcttcgttgattcattattgaatgttgatacatcgcagccaatgatttccatggattcc
aatattctttctgatggtgaaaatatgatagaaccccaaaagttagaaggagcttgtgat
gatccctctggaaaaggaatggattctactgaagaagcagcaagcatttatttgcaaaaa
gaactagagagtaaaatgaagctgccgaaatacatgaaaatgctggaagctagggctgct
ctacccatagctaagctgaaggataatttcctacatttgctaaaggacaatgatgtgatt
gttgtttgcggggaaacaggttgtggtaaaacgacacaggttccgcaatttattttggat
gacatgattaactcggggctaggtggatgttgtaacatagtgtgcacacaacccaggaga
ttagcagccatctctgtggcagaaagagtgtcagatgagcgatgcgagtcctcacctggt
agtaatgattcattagttggttatcaagttcgccttgatagtgccaggaatgagaaaaca
agacttctcttttgtaccacaggcatccttcttagaaagttggcaggaaataaggacttg
gctggtatcacacatgtcatagttgatgaagtacatgaacgatctcttttgggggacttt
ttgctcattgttctgaaagacctgattgggaggcaagcttctcatagaaggcaaaaattg
aaagtggttctcatgtctgcaacagtcgattcgagtttgttttcgaggtattttggagat
tgccctgtaatcactgcggaagggagaacacatcctgtttcaacttactttctcgaggat
gtttatgaaaaacttgaatatcatcttccttcagattctcctgcatcaggaacatttttg
atgccgaataaaggaaagcctggtagcagttctgtggataaccgcagaggaaagaagaat
cttgttttatcttcctggggtgatgaatctctactttttgaagactatgttaatccctgt
tatattccagatttttttgagtgctacagtgagcaaacacgtcagaatctaaaacgctta
aacgaagatgtgattgatttcgatgttcttgaagatttgatatcctatatcgatgaaaat
tatccaccgggggccattcttgtctttcttcctggtgttgcagaaattgacttgctggtt
gataaattaacagcttcattccggtttggtggagtgtcatctgattgggttcttcctttg
cattcatctcttgcatcaacagaccaaagaaaggtgtttgtgtccccacctcaaaatata
cgcaaggtaattgttgccacagatattgcagagaccagcataacaatagatgatgtggtt
tatgtggttgacactgggaggcacaaagagaaccgttacaatccacataagaaaatgtca
agcatcgtggaggactggatatcttgggcaaatgcaaagcaacgccgaggaagagctgga
cgtgtgaaacctggaatatgcttttgcttgtatactcgctatagattcgaaaaactcatg
cgcccctttcaggtacctgaaatgttgcggatgccattgactgagttgtgtctacaaata
aaatcactttctttaggagatataaaatcctttttactaaaggctatagaaaccccacgt
gaagatgttatttcctctgcaattgacttactatataaggttggagcctttcaaggagat
gaggtattgtcacctcttggatatcatttggcaaaactgcctgtggatgttttgattggg
aagatgatgttgtatggtgcagtatttggttgcctatcaccaattctttcgattgcagca
tttttgagttacaagtttccgttcgtctatcccaaagatgagaaacaatatgtggagaga
gcaaaatcagcattgttgagtgaaagcttggacaatatacttgcttccaatgaagaaaac
aaagaatcagaccacttgttaatggttgttgcctacaataaatgggccaggattctgcgt
gagaacggggcaaaagctgctcagcgtttttgtcgttcatacttcttaaatagctctgtt
atgtatatgataagggacatgcgtattcaatttggaagtttattagcagacattggactc
atcaatctcccaaaacttactatgagcgatggtagaaggaaagacaagcttgatagttgg
tttgctgatatgtctcagccattcaatatgtatgcatgccattcttcagttattaagtca
attgtatgtgcaggtctctatcccaatgtggctgcaactagagaaggtattgttggagca
tctttaagtgacagtaaagcaccatacagtagccctgctgtgaaggatcgtcctatatgg
tctgatggaagacgagaagttcacatacatccttcctctgtgaatcataatgcgaaaggt
tttcagtatccatttcttgccttccttgaaaaggttgagaccagcaaggtgttccttcga
gatactaccatcatctctccttactctattcttctgtttggtggctccatggttatccaa
catcagacaggactggtcattatagacggctggttaaaacttactgccccagcacagatt
gctgttctttttaaggaactccgcgtgacgctccatgctgttctaaaggaacttatcagc
aagccagagagggctacctttgtcaacaatgaagtggtgaaatctattgttcatctgttg
ctagaggaagataaagctcaacaatctctacattga
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integrated database retrieval system
