Elaeis guineensis (African oil palm): 105051907
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Entry
105051907 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 4A
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03440
Homologous recombination
egu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105051907
03460 Fanconi anemia pathway
105051907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egu03032
]
105051907
03400 DNA repair and recombination proteins [BR:
egu03400
]
105051907
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105051907
DNA replication proteins [BR:
egu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
105051907
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
105051907
Bloom's syndrome complex (BTR)
105051907
FA (Fanconi anemia) pathway
105051907
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cob_adeno_trans
HHH
Motif
Other DBs
NCBI-GeneID:
105051907
NCBI-ProteinID:
XP_073099875
UniProt:
A0ACM7BCN9
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Position
9:complement(7307980..7322253)
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AA seq
1251 aa
AA seq
DB search
MNKEAFPRNKPPKINWLHHVATFEDFSCQEKFLSSNFLFSLSSQKLRPEESAEGMLCTRS
IACTIQGPERLQSLQIEKAWKALCXNQGTSKQYLRPGLTAPVLNHNTDCRSARVSNSSNN
INNVVDFQRPGMSSHESIYPHEASGDLPCKSLLGGDSFMRNSFWKNNDYNTKVDASLITR
KPDVSGASMPHSSSHIGPENHQTVHADNDKHANDDFLDALDDDEIMEKIDVDQIVMEHYQ
ATGIPEVSASKHTPFTPVGSGGNRTGPSENSLPMELCEICIHGFKLAFCPEATTHLQEMK
DQLIAVSNELLDNAAELGPQQCENLRQERLHLNKQIQVLEKYLHSLTQDGETWRSHLTAS
TATAQVFQPETPVNTFPIDPARFNSQVHIGNEPGNSGAWSSMASFSYTDRTSILSAHVER
EMFTPKLFDVNYIEGSSDKRWKSEDFPWTKKLEANNRKVFGNHSFRPNQREVINATMSGH
DVFVLMPTGGGKSLTYQLPALICPGVTLVVSPLVSLIQDQIMHLLQANIPAAYLSASMEW
AEQQEIFRELMSDICKYKLLYVTPEKVAKSDVLLRHLDNLYSRGSLARIVIDEAHCVSQW
GHDFRPDYQGLGILKQKYPSTPVLALTATATASVKEDVVQALGLVNCIIFQQSFNRPNLW
FSVMPKTKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQEYGHKASFYHGSMDP
LQRTYVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ
RSSCVLYYNYSDYIRVKHMLTQGVIDQSPVSIGTRRNSLVSSDRVLETNIENLLRMVSYC
ENDIDCRRLLQLIHFGEKXDPMRCRKTCDNCSKMLSCIDKDVTDIAKQLVELVISMGQKY
STSHILEVYRGSLSQIVKRHRHNILDLHGAGKHLAKGEASRVIRHLVIEDVLAEDVRKSD
IYGSVSSILKVNESKAQKLCSGRQPVILRFPAPARASKMSRSEVTPAKGSLLPEMMSTPS
IDANGPSQNEVDLNLSAKLYAALRMLRTVLVKEAGEGVMAYHIFGNATLQQISKRVPRTK
EELLEINGIGKAKIHKYGDRVLETIESTIREYQKANRNSSSSSNENADAVKRRRRSTGID
SDVNDDVFVESTVQSKKRVTKVRNDQKGAPGTASISTCNDRCIDLDLDGYDMETEDWNPK
AKQKASGRILPQWSRPGSKGFLVQFLLVDFFYRLESATPWFLHPFPFSLPP
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggaagcattcccaaggaacaagccacctaagatcaattggttgcatcatgtg
gctacttttgaggatttctcttgtcaagagaaattcttgagctcaaactttctgttttct
ttatcatcacaaaaactcagacctgaagaaagtgctgaagggatgctgtgcacgaggtct
attgcttgtactattcaaggacctgagaggctgcaaagtttacaaattgagaaggcatgg
aaagctctctgcnaaaatcagggaacaagcaagcagtatttaagacctggattaactgct
ccagtgctgaatcataatacagattgtcgatcagctcgagtttcaaactcctccaacaat
atcaacaatgttgttgatttccaaagacctggaatgtcatctcatgaaagtatctaccca
catgaagcatctggtgatttaccatgcaagtcactccttggaggtgattcatttatgaga
aattctttctggaagaacaatgattacaatacaaaggttgatgcaagtttgatcacgagg
aaaccagatgttagtggagcatcaatgccacacagttcttctcatataggtcctgaaaat
caccaaactgtgcatgctgataatgataagcatgctaatgatgattttctagatgctttg
gatgatgatgaaattatggagaaaattgatgtagaccaaatagtcatggaacactatcaa
gccactggaatacctgaagtatcagcatctaaacatactccttttactccagttggtagt
ggaggtaatagaacaggccccagtgaaaatagcttgccaatggaactgtgtgaaatatgc
attcacggcttcaagctggctttttgcccagaggcaacaactcatttgcaggagatgaag
gatcagttgattgcagtatcaaatgaacttcttgataatgctgctgaacttggtcctcaa
cagtgtgaaaatcttcgccaagaacggttgcatctcaataaacagattcaggtgcttgaa
aaatatctccatagtttgactcaagatggtgaaacatggagatcgcatttgacagcctca
acagctactgcacaggtctttcaacctgagactcctgtgaacacatttcctatagatcct
gcaagattcaattcccaggttcatataggaaacgaaccagggaattctggtgcttggagt
tcaatggcatcattctcctatacagatagaacaagtattctatcagcacatgtggaaaga
gaaatgtttactccaaagctctttgatgttaattacattgaaggttccagtgataagagg
tggaagagtgaagattttccatggaccaagaaactcgaggccaataacagaaaagtgttc
gggaatcactcctttcgtcccaatcaaagagaggtgattaatgcaacaatgagtggacat
gatgtttttgttctgatgccaactggcggtggcaagagcctgacataccagcttcctgct
ctaatctgtcctggagtaacattagtagtttctcctctcgtttcgctcatccaggatcaa
ataatgcatctgttgcaggcaaatattcctgctgcttatctgagtgcaagtatggagtgg
gctgaacaacaggagatttttagagaattgatgtctgacatctgtaaatacaagttatta
tatgtaactccagaaaaagttgccaagagtgatgttttgttgagacacttggacaatttg
tactcacggggatcacttgctagaattgttattgatgaagctcattgtgtaagccagtgg
ggacatgattttaggccagattatcaggggcttggtattttgaaacaaaagtacccaagt
actcctgtgctggctctaactgctacagcaacagctagtgtaaaggaagatgttgtgcaa
gctcttggcctagtgaattgcatcatttttcaacaaagttttaaccgcccaaacttgtgg
ttttctgtgatgcccaaaacaaaaaagtgcctggaggacattgataaattcatcaaagaa
aaccattttgatgaatgtggcattatttattgtctttcaagaatggactgtgaaaaagtg
gctgagaaattacaggaatatggacataaagcatcgttttaccatggtagcatggatcct
cttcaaagaacatatgttcaaaagcagtggagcaaagatgaaatcaatataatatgtgcc
acagtggcttttggaatgggtatcaacaaacctgatgttcggtttgttattcaccattct
cttccaaaatctattgaaggttatcatcaggaatgtgggcgtgccggtagagatggtcag
cgttcttcttgtgttttatattacaactacagtgactatattcgggtcaagcacatgctt
actcagggagtaatagaccaaagccctgtatccattggaacaaggcgtaattctttagtt
agcagtgatagagtactcgaaacaaatattgaaaatcttcttcgcatggttagctattgt
gaaaatgatatcgattgcagacgcctactgcaattgattcattttggtgaaaaanttgat
cctatgaggtgccgaaagacatgtgataactgttctaaaatgttgagctgcattgataaa
gatgtaactgatattgcaaagcaactggttgagttagtgatatcgatgggccaaaagtat
tcaacgtctcacattctggaagtgtacagggggtccctgagccaaattgttaagagacac
agacacaatatcttggaccttcatggggctggaaaacatctagccaaaggtgaggcatcc
agagtgatacgacatttagttattgaggatgttcttgctgaagatgtacgaaaaagtgat
atttatggatctgtttcttctatattgaaggtaaatgaatcaaaagctcagaaactctgc
tctggcagacaacctgtcatactgaggtttcctgctcctgctagggcatccaaaatgagc
agatctgaagtgacaccagcaaagggttcattgcttccagaaatgatgagcactccatca
attgacgctaatggtccatcacaaaatgaagtagacttgaatctgtcagccaaactgtat
gcggctttgcgaatgcttcgaactgtgcttgtaaaagaagctggtgagggggtcatggca
taccacatatttggaaatgccacattgcagcagattagcaagagagttccaagaaccaaa
gaagaacttcttgagatcaacggaattggcaaggcgaagatacataagtatggagaccga
gtattggaaaccatagagtctaccatcagagagtaccaaaaggcaaacaggaacagtagt
agcagcagcaatgaaaatgctgatgcagtaaagcggagaagacggtcaacaggcattgat
tcagatgttaatgatgatgtttttgtagaaagcactgtacaatcaaaaaagcgggtaaca
aaggttaggaatgaccaaaaaggtgcacctggtactgcaagtatatcaacctgcaatgac
cgctgcatagatctcgatctggatggatatgacatggagactgaggattggaatccaaag
gcaaaacaaaaggcttcaggtagaatcctgcctcaatggtcacgaccaggaagcaaaggg
tttcttgtccaattcctcctggtggatttcttctataggctggagagtgcaactccttgg
tttctgcatccttttccattcagtctgccaccttaa
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