Elaeis guineensis (African oil palm): 105052385
Help
Entry
105052385 CDS
T03921
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105052385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105052385
03019 Messenger RNA biogenesis [BR:
egu03019
]
105052385
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105052385
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105052385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
105052385
NCBI-ProteinID:
XP_010931479
UniProt:
A0A6I9RT39
LinkDB
All DBs
Position
10:37052675..37060938
Genome browser
AA seq
539 aa
AA seq
DB search
MHPFFPSLPNQIQLQGGADPSNQQAMLLNPTQFPSHGLNPQFPAPPMANFNNQNSSLRNF
SGNPMGMPNQPLSMPFPSLLRGPNVPPMAQNNRMGVLPQPGPFGMNQAVQALNQVMAMQL
LGQQNLNFLASLQPGSLFLANNLPQNINQVAGLPNEQVRLQDLTMQGNQISALTFPPSSH
PRGSNHPGFVGSPHMSMNNSNTNISSEKSSVDAKKNTVGQSGKPISRSPMQNHQNGKNMQ
RSGHWPQVNSVGDGERNVNSENSPSKNFTRNVHGYGKRKSSHIRFQKPQLHHSKNANESG
GPFNMPGRRGQDKWRQRKPQLANCSKPATAGSKRCLHVNYTENEIQQWREARRKNFPTRA
NVEKNLTGSGTSNEDADSDAKLRCQQLKEVLAKQAELGVEVAEIPPSYFSELENHPENEN
ERKALHVTDQFPSKYKNKRGSHGRDKWNAKRPKLKNEASTDSSPTVKKREPTLLRKLLNA
EIKRDKIRLLQAFRFMTLNSFFNGLNDKPLEFPEITVKDAGLENGIGFKEESILKQGGH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccttcttcccttccctccccaaccaaatccaactccaaggaggcgccgatcca
tctaatcagcaggcgatgctgttaaaccctactcaattcccatcccatggcctaaaccct
caatttccagctccaccgatggcgaatttcaacaatcaaaattccagtttgagaaacttc
agcggaaaccccatgggcatgccgaaccagcctctttcaatgccttttccttccttgttg
agaggccccaacgttcctccaatggcccaaaataatcggatgggtgttcttccccaaccg
gggccattcggtatgaaccaagctgtgcaagctctgaaccaggtcatggcgatgcagctg
ctcgggcagcaaaatctcaactttcttgcttcgttgcagccgggcagcctgtttttggcc
aacaatttgcctcagaacatcaaccaagttgcgggtctgccgaatgagcaggttcgtttg
caagacctaacgatgcaagggaatcagatcagtgctctcacctttcctccgtcctctcat
cctagaggatctaaccaccctggctttgttggtagtcctcatatgtctatgaataattca
aatactaatatcagtagcgagaaatcatctgttgatgccaagaaaaatacagtgggtcag
agtggcaagcccatctcccgaagtccaatgcagaatcatcagaatgggaagaatatgcaa
cgaagtgggcactggccccaggtgaattctgttggagatggtgaaagaaatgtcaactct
gaaaattctcctagcaagaactttacaagaaatgttcatggatatggaaaaagaaaatca
tcacatataagattccagaaacctcaacttcatcactcaaaaaatgcaaatgaaagtggg
ggaccatttaatatgcctggtagaagaggacaggacaaatggagacaaagaaaacctcag
cttgcaaactgtagtaaaccagctacagctggaagcaaaaggtgccttcacgtaaactat
actgaaaatgaaatccaacaatggcgtgaagcacgcagaaagaactttccaaccagagct
aacgtagaaaagaacttgactggaagcggcacaagcaatgaagatgctgacagtgatgcc
aagctccgctgccagcaattgaaggaagttttagccaaacaggcagaactaggtgttgaa
gttgctgaaatacctcccagttatttttctgaactggagaaccatcctgaaaatgaaaat
gagaggaaagcactccacgtgactgaccaatttccaagtaaatacaagaataagaggggt
agtcatggtcgggataagtggaatgctaaaaggccaaaattgaaaaatgaggcatctact
gattcttctcccactgttaaaaaaagggaaccaaccctgctgcggaagcttctgaacgct
gagataaagagagacaagatccggctattgcaagctttcaggtttatgaccttaaattct
tttttcaatgggttgaatgataagcccttggaatttccagagattacagtaaaggatgca
ggactggagaatggaattggttttaaagaagaatccatccttaaacaaggtggacattga
DBGET
integrated database retrieval system