Elaeis guineensis (African oil palm): 105052717
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Entry
105052717 CDS
T03921
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105052717
09123 Folding, sorting and degradation
03018 RNA degradation
105052717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105052717
03041 Spliceosome [BR:
egu03041
]
105052717
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105052717
mRNA degradation factors
5'-3' decay
Lsm complex
105052717
Spliceosome [BR:
egu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105052717
Complex C
U2 snRNP components
105052717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
DUF150_C
Motif
Other DBs
NCBI-GeneID:
105052717
NCBI-ProteinID:
XP_010931941
UniProt:
A0A6I9RTL6
LinkDB
All DBs
Position
10:32577538..32582829
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AA seq
93 aa
AA seq
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MLFFSYFKELVGKEVTVELKNDLAIRGILHSVDQYLNIKLENTRVVDQDKYPHLLSVRNC
FIRGSVVRYVQLPPDGVDIDILHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcttctcgtatttcaaggagctggtggggaaggaagtgacagtggagctaaag
aacgacctcgccatccgaggcatcctccattcggtagatcagtacctcaacataaagctc
gagaacactagggttgtcgatcaagacaagtacccccatttgttgtcggtaagaaactgt
tttatcaggggatcggtggtgagatatgttcaactccctcccgatggagtggacatcgat
attcttcatgatgccactaggagagaagcccgcggtggctga
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