Elaeis guineensis (African oil palm): 105052818
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Entry
105052818 CDS
T03921
Name
(RefSeq) crossover junction endonuclease EME1 isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03440
Homologous recombination
egu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105052818
03460 Fanconi anemia pathway
105052818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105052818
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105052818
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
105052818
NCBI-ProteinID:
XP_010932054
UniProt:
A0A6I9RTT2
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Position
10:19503894..19523550
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AA seq
630 aa
AA seq
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MDRHCPAPFAVEIPSDDDDLDDDAATFSPSLPPLKKRLELDHGSDAAGRGVGGGAPPPLL
VIDDDPTPRKPSRDPTPSFVAETPLPADHAFDSDASIVRCTLARSNTASGSSRKFSGIAG
LICLESDNESEGNAHEGSPKTLRTMTAACDVPEHSEINSNFLVVESPVATGSEKDHSRLC
STINEAVSGRNDTNDELISGNTNRGSFDGIRGATNLIQILGDSPQHGHTFAEDFTVLAAS
CEEEHNLLGQLDSTAKWKGNHAAVGADKDNKNEPAVRKKQLKEEKARLVEERKRKRQQDK
LQKEALKAEAAEMRKLVKEKQKWERGKYALKSIVAEIDTKVVENGLVGGHLLTRLAEKGL
SFRITSNPIERSIMWKMNMPDQIAQLSSAQLEVPYIIFVYQAEEFCDLVISESLIDHVHR
VRSRYPSFTICYLTNKLMSYINKCEQSQYKNPSNVSCWKRPPVEEILAKLTTHYTRVHSR
QCIDEAELAEHVVGLTSGLANCQFRRKLTWLSVNANGSIIPKDFIDKNLVKKNIWLKALI
SIPKVQPRYAIAIWKKYPTMRSLLNVYMDPNKSVHEKEFLLKDLMVEGLLGNEDRRLGEI
CSKRVYRILMAQSGGIKTEDVEEGADYFGC
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccactgcccggcgcccttcgccgtcgagatcccatccgatgacgatgacctc
gacgacgacgcggccaccttctctccctcacttcctcctctcaagaagaggctagaattg
gaccatggcagcgacgctgctggccgtggagtcggaggaggagcgcctccgccccttctt
gtgatcgacgacgaccccacccctcggaagcccagtcgggaccccacgccctctttcgtg
gccgaaacccctctcccggccgatcacgccttcgactccgatgcctccattgtccggtgt
acccttgctcgctccaatacagcaagcggttcgtcccggaaattctccggaattgctggc
ttaatatgtttggagtcagacaatgagtcagaaggcaatgcccatgagggaagtccaaaa
actttaagaaccatgactgcagcttgcgacgtgccagagcactctgagataaactctaac
ttccttgtggtggaaagtccagtagctacaggctctgaaaaagaccattcgagattgtgt
tcgacaataaatgaagctgtttcaggcagaaatgatacaaatgatgaacttatttctgga
aatactaaccgtggttcatttgatggtatcagaggtgccactaacttgatacagattctt
ggagacagccctcaacatggtcataccttcgcagaagattttactgtactggctgcaagc
tgtgaggaggagcacaacttgttggggcaactagatagtactgcaaagtggaaaggaaat
catgcagcagttggtgctgataaagataataagaatgaaccagctgtgagaaagaagcaa
ctgaaagaagaaaaagctcgtttagttgaagaacgaaaaagaaagaggcagcaagataaa
ttacagaaagaagctttgaaagctgaagcagcagagatgagaaaattggtgaaggaaaag
cagaaatgggaaagggggaaatatgcactaaaatctattgtagctgagattgatactaaa
gttgttgaaaatgggttagttggaggacatcttctcaccaggttggcggaaaaaggcctt
tcttttcgtataacttctaatccaatcgaaaggtcaattatgtggaaaatgaacatgcct
gaccaaattgctcagctctcatcagcgcaattggaagtgccttacataatatttgtatat
caagcagaggaattttgtgatcttgtaattagtgagtcccttatcgatcacgtccacaga
gtacgaagtcgctatccatcattcacaatttgttacctcacaaacaaattaatgagttac
atcaataagtgtgaacaaagtcagtacaagaatccatcaaatgttagttgttggaaacgt
ccaccagttgaggagattctggcaaaattgacaactcattatactagagtgcactcaagg
caatgcatagatgaagctgaactagctgaacatgttgtcggtttgacatctggccttgcc
aattgccaatttaggaggaaattgacatggctttccgtaaatgcaaatgggtccatcatt
cctaaggatttcatcgacaaaaatcttgttaagaaaaatatctggttgaaggcactaata
tccattcctaaagtgcagcccagatatgcaattgccatttggaaaaaatatccaactatg
agatctcttttgaatgtatacatggatccaaataaatcggtgcatgagaaagaatttctt
cttaaagatttgatggttgaagggcttttaggcaatgaagacaggaggttaggtgagatc
tgttctaagagagtgtatagaatacttatggcacaaagtggaggcatcaaaactgaagat
gttgaggaaggagctgattattttggctgctaa
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