Elaeis guineensis (African oil palm): 105052919
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Entry
105052919 CDS
T03921
Name
(RefSeq) small RNA degrading nuclease 1 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105052919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egu03009
]
105052919
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
Pre-60S particles
RNases
105052919
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
PH_PHS1
Motif
Other DBs
NCBI-GeneID:
105052919
NCBI-ProteinID:
XP_010932207
UniProt:
A0A6I9RU18
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All DBs
Position
10:17616313..17627753
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AA seq
479 aa
AA seq
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MDKAISNADKEVLAEIVRLTQKQGLRGREGGWKDFLHSNDRVSCAVYDPTRKSKDVLVAF
LQTFEEKEQKFFQKMIKRLAEYKAFEKFITDFPDQESPQQRLVRLTKEHPHYPRCYSFPS
FDEEWIIMRLGKVSKVMKSKTMISIDCEMVLCEDGTQAVVQVCAVDENLEVRFDKLVNPN
KAVADYRTDITGICAKDLEGVTCSLADVQKSIKKLLSHGTILVGHSLHNDLQVLKIDHRR
VIDTSYIFKYLDVAVNCSPSLNNLCKSVLGFALRAEGEPHNCLNDAKATMRLVLAKLEHG
FDDPISVVDNNVSDSDLAKLLLHKIPVDVPYQDLLKLFPENYNVDIKNDLKVRGLSYSTF
AVFKDAREADEAFKGIEAIENRDSSGRPQKVVFLEISTGKSISFYIRKMKPAAQLNGCDP
LNKRMTQDKTNDSKRQRTCLHHCEHDKEIEKLKQALRQREDEISELRKIASALARKNGF
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagcgatttcgaacgcagacaaggaggttcttgctgagattgtgaggctcacc
cagaaacaaggattaagaggtcgtgaaggggggtggaaagattttttgcatagtaatgat
cgggtatcttgtgctgtttacgatccgacaagaaagtcgaaggatgtattagttgctttt
ctacaaacgtttgaggaaaaagagcagaagtttttccaaaaaatgataaaacgtcttgct
gaatacaaagcatttgagaagttcataactgactttcctgaccaagagtcccctcagcag
agactggtccgtttgacaaaggaacatccacattacccacggtgttactcttttccatca
tttgatgaggagtggataatcatgcggctaggtaaagtttctaaagtaatgaaatcaaaa
actatgatttcgattgattgtgagatggttttatgtgaggatggtactcaagccgttgta
caagtttgtgcagtagatgaaaatttggaggttagatttgataaacttgtcaatcccaat
aaagctgttgctgactatagaacagacatcactgggatatgtgctaaagatttggaggga
gttacttgttcattagctgacgtacagaaatccattaagaagcttttatcccatgggact
attttagttggccacagcttacataatgatttacaagtactaaaaattgatcatcgacga
gttattgacacatcatacatcttcaaatatttagacgtagcagttaattgttcgccttct
ttaaacaacttgtgtaagtctgtattgggttttgcacttcgggcagaaggtgaaccacat
aattgcttaaatgatgcaaaagctacaatgaggctggttctagctaagcttgaacatgga
tttgacgatcccatttctgttgttgacaacaatgtatctgactctgatctagcaaagctg
ctacttcacaagataccagttgacgtgccttatcaagacctgttgaaattatttcctgag
aattataatgttgatatcaagaatgatctaaaagtccgaggccttagctactctacattt
gctgttttcaaggatgccagagaggctgatgaagcatttaagggaatagaagccatagaa
aacagggactccagtggtcgacctcagaaggttgtgttcttggaaattagcacagggaaa
agcatcagcttctacattcgaaagatgaaacctgctgctcaacttaatggatgtgatcca
ttaaataagagaatgacccaagataagaccaatgattcaaaaaggcaacgaacatgttta
catcactgcgagcatgataaagagatagagaaattgaaacaggccctccgtcaacgagaa
gatgaaatatctgagctgcgaaagatagcatcagctcttgctcggaaaaatggattctga
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