Elaeis guineensis (African oil palm): 105052942
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Entry
105052942 CDS
T03921
Name
(RefSeq) uncharacterized protein
KO
K24755
WD repeat-containing protein 76
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egu04121
]
105052942
03036 Chromosome and associated proteins [BR:
egu03036
]
105052942
03400 DNA repair and recombination proteins [BR:
egu03400
]
105052942
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105052942
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105052942
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
105052942
DSBR (double strand breaks repair)
Other DSBR factors
Others
105052942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_RFWD3
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_2nd
WD_LRWD1
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
105052942
NCBI-ProteinID:
XP_010932229
UniProt:
A0A6I9S2D3
LinkDB
All DBs
Position
10:17115802..17126782
Genome browser
AA seq
467 aa
AA seq
DB search
MASGAQNDYERRRLENIRRNSEMMASLLLQRKAADLSASLKRPSSKAPKPSPDRKKSCPS
PQSPIVIRRSLRTRGLPPDQSPHPQPSDAAPSPPPSDLAATAVQKHGPLLAREVFIQGPG
SSDCGFKDAILEASGRSSSDIGKEGGPFDPRSSLVLRPDNVGKVLSERILTVKFFPFGDR
TVIAAGNKLGHVGFWDVGYREGDGDGVYVYAPHSAPVSGISIHPFSPTKVFTCSYDGFIR
LMDIGKETFNMIYYSDTSIYSICPQPNDNNYLYLGEGLGELKMWDERVGKVSSSWDLHEQ
RINTIDFHPEHSNLVATSSTDGRACLWDLRSIKTDRPECLKTIQHHRAVHSAYFSPSGSF
LATTSIDDSVGILSGNNFDDLTLIRHNNQTGRWLSSFRAIWGWDDSYLFLGNMRRAVDVI
SVSERTTTPLESEHMTSIACRFAAHPCKHGSLACATSGGKVYLWTKS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggagcccaaaacgattacgagcgccggaggctggagaacatccgccggaat
agcgagatgatggcctccctcctgctccagcggaaggccgccgacctctccgcctccctc
aagcgcccctcctccaaagcccctaaaccctcccccgaccgcaagaaatcctgcccctcc
ccacaatcccccatcgtcatccgccgctctctccgcacccgcggcctccctcccgaccaa
tccccccacccccaaccctccgacgccgctccatctcctccgccgtccgatctcgccgcc
accgccgtccagaagcacggcccgctcctcgcgcgcgaggtcttcattcaggggcccggt
tcatctgattgcggctttaaagacgcaatcttggaggcctccggtaggtcaagttcggat
attgggaaggagggagggccgttcgatccaaggtcgtctctggtgctgagaccggacaat
gttggtaaggttctgtctgaacggatactgactgtaaaattcttccccttcggagatcgg
acggtgattgctgccggcaacaagctagggcatgttggcttttgggatgtgggttatagg
gaaggggatggagatggtgtctatgtttacgctccacattcggctcctgtgtcggggatt
tcgatccatcccttctccccgacaaaggtttttacttgcagctatgatgggttcattcgt
ttgatggatatcgggaaggaaactttcaatatgatctattacagtgatacttctatttac
tctatttgtccacagcctaatgataataactacttgtatcttggtgagggattgggggag
ctgaagatgtgggatgagagggtggggaaagtctcaagttcttgggacctgcatgagcaa
aggattaatacaatagattttcatccagaacactcaaacttggtagctacaagttcaaca
gatggaagggcctgcttgtgggacttgagaagtataaagactgatagaccagaatgcttg
aagactattcagcatcatagagctgttcattctgcatatttctcacccagtgggagcttc
cttgcaacaacaagtattgatgatagtgttggaattctgagtggcaacaacttcgatgac
ctaaccctgatcagacataacaatcagactggtagatggttatcatcattcagagcaatc
tggggatgggatgactcctatttgtttttaggtaatatgagaagggctgttgatgttatc
tcagtcagtgagagaactaccacacctctggaaagcgagcacatgacttcgatagcctgc
cggtttgctgcccatccatgtaaacatggttctctggcctgtgccacttctggtggtaag
gtatacctctggacaaaatcttaa
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