Elaeis guineensis (African oil palm): 105052957
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Entry
105052957 CDS
T03921
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105052957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105052957
03009 Ribosome biogenesis [BR:
egu03009
]
105052957
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105052957
Spliceosome [BR:
egu03041
]
Complex A
U1 snRNP components
U1 related factors
105052957
Complex B
105052957
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105052957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
105052957
NCBI-ProteinID:
XP_010932245
UniProt:
A0A6I9RTP7
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All DBs
Position
10:16665709..16686597
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AA seq
701 aa
AA seq
DB search
MNPFDVRYADPSSYRERRSDLMRPPQLNGPLMPPSAVGVGLGVSPMAGRGGSTPFLPPAG
PDFAAGRGGGIGAPMGGGSFSTGFTSSQFTSGGGGGDFGGRGGGGRGFDAGRGGRGGAGG
GRFSGGDRGGRSGRGRGFDSARTGGSGDGGRGRGSGRGQDFGGRGVGRGRGFEGGRGGGG
ARGFEGGRGGGGGRGFEGGRGRGFDGGRGGGRFGGSGARDFGKPRDDLDKLSLPKQDFHD
LIPFEKNFYVESPAVQAMSEQDAMLYRKGREITVEGRDVPKPIRFFHEANFPSNILQAIA
KCGFIEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLAHGEGPIV
LVLAPTRELAVQIQEEAVKFGSHSNVRSTCIYGGAPKGPQIRDLKRGVEIVIATPGRLID
MLEACHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVESLA
RQFLHNPYKIRIGSPDLKANQSINQIVEVMSENEKYSRLVKLLGELMDGSRILVFLETKK
GCDQVTRQLRMDGWPALSIHGDKAQAERDWVLAEFKSGNSPIMTATDVAARGLDVKDIKC
VVNYDFPTSLEDYVHRIGRTGRAGAKGTAFTFFTHANARFARDLIKILQEAGQSVTPALA
SMARSAGGGSGGNFRSRGRGYGNRALMSGSNSVPLGGRRPW
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttcgacgtccgctacgcggatccgagctcctacagggagaggcgaagcgat
ttaatgcggccgccgcagttgaatggcccgctgatgccgccgtccgccgtcggcgtgggc
cttggcgtatcccctatggctggccgcggcggctccacccccttcctgccccctgccggc
ccggattttgccgccggaagaggaggcggcatcggcgctcccatgggcggtggcagtttc
tctactggttttacctcgtcccaatttacatctggtggaggcggcggtgactttggaggc
cgtggtggtggggggagaggattcgatgctgggagaggaggccggggaggagcaggagga
ggtagattctctggaggtgaccgtggtggcaggtctggaaggggccgaggatttgattcg
gcgaggacaggcggaagtggagatggcggtcggggaaggggaagtgggagaggccaagat
tttggtggccgtggggttggaagggggagaggattcgaaggtgggcgtgggggtggtggt
gctaggggattcgaaggtgggcgtgggggtggtggtgggaggggattcgaaggtgggcgt
gggaggggattcgatggcggacgtgggggtggtcggtttggcggcagtggtgctagagac
tttgggaagccaagagatgaccttgataagctttctcttccgaaacaggattttcatgac
ctcatccctttcgagaagaacttctatgtggagagccctgcggtgcaggccatgtccgag
caggatgccatgctttatcggaagggccgggagataacggttgaaggtcgtgatgttccc
aagcctattaggttctttcatgaggccaacttcccgagcaatattttgcaggcaatagct
aaatgtggtttcattgaaccaacaccaattcaagctcaggggtggccaatggctttaaag
ggaagagatttaattggtatcgcagagactggttcaggaaagacattagcatatctgctg
cctgcattggtgcatgttagtgcacagcctcgattggctcatggagaaggtccaattgtt
ttggtcctagcacctacaagagaactggctgttcagattcaagaagaagccgtgaagttt
ggatcacattcaaatgtcagaagcacatgcatctatggtggagcacccaaaggaccacag
attcgtgatcttaaaagaggagttgaaattgtcattgcaacacctggtcggctaattgat
atgttggaagcttgccatacaaacctgcgtagagtaacataccttgttctggatgaggca
gatcgcatgctggacatgggatttgagcctcagataagaaaaatcgtgtcccaaattcgc
cctgacaggcagacattatattggagtgccacatggccaagagaagttgaatctttggca
agacagtttttacataatccctacaagataaggattggttcacctgatctgaaagccaat
caatcaataaaccaaattgtagaagtcatgtcagagaatgaaaaatactccaggctggta
aaactcttgggtgaattaatggatgggagccggatcttggtatttcttgagacaaagaag
ggatgtgatcaggtgactcggcagctcaggatggatggatggcctgccctatctattcat
ggagataaagcccaagctgaaagagactgggttctggcagagtttaaaagtggaaatagt
cctattatgactgccactgatgtagctgcacgtggtcttgatgtgaaagatataaaatgt
gtggtcaattatgatttcccaacgagccttgaggattatgttcacaggattggacgaact
ggtcgtgcaggtgccaagggcactgccttcacctttttcactcatgcaaatgcaaggttt
gctagggatcttattaagatcctgcaggaagctggccagagcgtaactccagcattggca
tccatggctagatcagctggtggaggttctggagggaatttccgatcaaggggccgaggc
tatggcaatcgtgcacttatgtctgggtccaactcagttccacttggagggagaaggcct
tggtaa
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