Elaeis guineensis (African oil palm): 105053216
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Entry
105053216 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105053216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105053216
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105053216
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
nSTAND_NTPase5
Tudor_KDM3B
Motif
Other DBs
NCBI-GeneID:
105053216
NCBI-ProteinID:
XP_010932609
UniProt:
A0A6I9RUR3
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Position
10:complement(2483070..2514578)
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AA seq
1286 aa
AA seq
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MTSSRRLSNGRSPLVRKQSQITSFFSPGKGSQEKHSPSPSPNPNPSSSPSPSSKPSPDLF
PSLRKKNKPLLVIPSIPASKPRTPLTAGERAYSEEVVGRRIRVFWPLDKAWYEGSVKYFD
EASGKHLVQYDDAEEESLDLGKEKFEWVEEEPSRKLRRLRRMSSPVETPCSAGDVEEDGS
SVEDSTDDEEWGKGMGKDMVEDDSEEEIVVSSRRSRSGSSSGSRKRKKIEVEKLDCAKKV
RFDGDGEKSTSKASLSSIRSSTVGSLSNSERGHVLYNLDSTLTGEAAERFGKREAERFRF
LGEGRKDAHGRQPGDADYDPKTLYLPPEFLRSLSGGQRQWWEFKSRHMDKVLFFKMGKFY
ELFEMDAHIGVRELDLQYMKGEQPHCGFPEKNFSMQLEKLARKGYRVLVVEQTETPEQLE
LRRKEMGSKDKVVKREICAXVTKGTLTDGESLLTNPDTSYLMSITENRQCFENQKEGETI
IGLCVVDVSTSKFMIGQFEDDSDRHCLCSILSELRPVEIIKPSKVLSPETERVLRNNTRN
PLINDLVPFTEFWDAEKTIGEVRKYYSLSRRLPASANDSISANFDNLVNDSLALPDMLAE
LVSAGNDGLYALSALGGCLFYLRQAFLDETLLNCAKFEPLPCSDFFSTIQNSYMILDAAA
LENLEILENNRNGGPSGTLFAQLDHCVSAFGKRLLKQWLARPLYNTRFILERQDAIAAMK
GIGLSSALEFRKELSRLPDMERLLARLFASCGANGRNSNRVVLYEDAAKKQLRDFIAALR
GCQLMVQACSSLSTILSTTESSLLHYLLTRGKGLPDMCSLVSHFKDAFDWSEADRSGRII
PHEGGDVEYDLACKTVKEIESALTRYLKEQRKLLGDASINYVTVGKDLYLLEVPESLRGA
VPRDYELQSSKKGYFRYWTPKIKEFLSELSQAEADKESKLKGILQRLIKYFSEHHSKWRQ
LVSVTAELDVLISLAIASDYYEGPACRPVIMERCHSDDIPCLSAKSLGHPILRSDALGKG
SFVPNDVSIGGAGHANFILLTGPNMGGKSTLLRQVCLSVILAQLGADVPAESFKLSPVDR
IFVRMGARDHIMAGQSTFLMELSETASMLSSATHNSLVALDELGRGTSTSXGQAIAASVL
EYLVHRIECRGLFSTHYHRLAVEYEKDTKVSLCHMACQVGKGVSGLEEVTFLYRLTPGSC
PKSYGVNVARLAGIPASVLQTAMAKSSEFEAGYGKRKHESEGELPDFIKDLLCATERWSC
QKDFHEKNLNLLSELQKRARLLVLES
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttcccgtcgcctcagcaatggccgctctcctctggtccggaaacagagccag
atcacctccttcttctcccccggtaagggttcccaagaaaaacacagtcccagtccaagc
cctaaccctaaccctagctctagccctagccctagctctaagcctagtccggatcttttt
ccgtccctacggaagaagaataagccccttctagtaatcccttctattcccgcttccaaa
cctagaaccccgctgaccgctggggagagggcctactccgaggaggtggtcgggaggagg
atcagggtcttctggcccctcgacaaggcatggtacgagggcagtgtcaagtatttcgat
gaggcctccgggaagcacctggtccaatacgacgatgctgaggaagaaagcttggacctt
gggaaagagaagttcgagtgggtcgaagaagagccctcgaggaaactccgacggctgagg
cggatgtcgagtcctgtggagacgccgtgcagtgcaggggatgtggaggaggacgggagc
agtgtagaggattctaccgatgatgaggagtggggtaaggggatgggaaaggacatggtg
gaggatgactcagaggaggagattgttgtaagctcgagaaggtcccggtcggggagttct
tcagggtctaggaaaaggaagaagatcgaagttgaaaagttggactgtgctaaaaaggtt
agatttgatggagacggagagaagagtacatcaaaagcctctttgagcagcatcagaagc
agcactgttgggtccttgagcaattctgagagagggcatgtcttgtataatcttgatagc
actctaactggtgaagcagctgaacggtttggaaaaagggaagcagaaagatttaggttc
cttggggaagggcggaaagatgctcatgggaggcagcctggagatgcagattatgatcca
aaaactctgtacttgcccccagaattcttgaggagtctgtcaggaggacagaggcaatgg
tgggagttcaagtcaaggcatatggataaggtcttgtttttcaagatgggaaagttttat
gagttgtttgaaatggatgcacatattggagtcagggagcttgatttgcaatatatgaag
ggagaacagcctcattgtggttttcctgaaaagaacttttcgatgcagttggagaaattg
gctagaaagggttaccgagttcttgttgtggaacagacagagacacctgagcagcttgaa
cttcgtcgtaaagagatggggtctaaagataaggtcgtgaaacgtgaaatatgtgctnat
gtcacaaaaggaacactgactgatggagaatcgctattgacaaatcctgatacttcttac
ctaatgtcgattactgaaaatcgccaatgttttgagaaccaaaaggaaggagagacaatt
ataggactctgtgtggttgatgtttccacaagcaagttcatgataggacagttcgaagat
gattcagatcgtcactgtttatgctcaatattatctgaattaaggcctgtggagatcata
aagccttctaaagtgctcagtcctgaaactgagagagtcttgcggaacaatacaagaaac
cctttaattaatgatttggttccttttacagaattttgggatgctgagaaaactattggc
gaggtcagaaaatattacagcctatcaaggagactaccagcatcagcaaatgacagcatt
tctgctaattttgataatctggtgaatgattcattggccttaccagatatgttagctgag
ctggtgagtgcaggcaatgatggattatatgccctttctgctcttggaggctgcctgttt
tatttaaggcaggcatttctggatgaaacattgcttaactgtgctaaatttgagccactt
ccatgctcagattttttcagcactattcagaattcatatatgatacttgatgcagcagcg
ctcgagaacctggagatattggagaataacagaaatggaggtccctcagggacactcttt
gcacagttggatcattgcgtttccgcatttggcaaaagattacttaaacaatggcttgct
agaccactgtataatacaaggttcattttagaacgtcaagatgccattgcagctatgaag
ggcattggtctttcatctgcgcttgaatttcgaaaagaattatcaaggcttccagacatg
gaacgtttgcttgcacgcctctttgctagctgtggggctaatggaagaaattccaacaga
gtggttctttacgaggatgcagcaaagaagcaactccgagattttattgctgctctccgt
ggttgccagttaatggtccaagcatgttcttcccttagtactatactaagcactacagaa
tctagtctgctccattatttattaacacgaggcaaagggcttccagacatgtgttcactt
gttagtcatttcaaggatgcctttgattggtcagaagctgatcgcagtgggcgcattata
cctcatgaaggaggtgatgttgaatatgatcttgcatgtaaaacagtgaaagagattgaa
tctgctctgacaaggtacctgaaggagcaacgcaagttgctaggagatgcatcgataaac
tatgtcactgttgggaaagacttgtatctacttgaggtacctgagagcttgaggggtgct
gttcctagggactatgagttacaatcatcaaagaaggggtatttcagatactggacacca
aaaataaaggagttcttgtcagagctttctcaagctgaggcggataaagaatctaagctc
aaaggcattcttcaaaggttgattaagtatttcagtgagcatcatagcaagtggagacag
ttggtttctgtaactgcagagctagatgttttaattagtctggcaattgcaagtgactat
tatgagggaccggcatgccgcccagtcattatggaacgatgccattcagatgatattcca
tgtttgtctgctaaaagtctgggacatcccattctccgaagtgatgccttaggcaagggt
tcttttgtgcccaatgatgtaagtattggtggggcagggcatgccaactttatccttctc
acaggcccgaatatgggtggtaaatcaactctacttcgccaagtctgcttgtctgtgatt
ttggcacagcttggagcagatgttcctgcagaaagctttaagctctctcctgttgaccgc
atctttgttcgaatgggtgcaagggatcatattatggctggccaaagcacattcttgatg
gaactttcagagactgcttcaatgctgtcttctgccacccacaattctctagtggcatta
gatgagcttggtcggggaacatcgacttctngaggacaagctattgccgcatctgtttta
gaatatcttgttcatcggatagagtgtcgaggcttgttttctactcattatcatcgttta
gctgtagaatatgagaaagataccaaggtgtcactgtgtcatatggcttgccaagttgga
aagggagttagcggattggaagaagttacttttctttatagactgactcctggttcatgc
cccaaaagctatggtgttaatgttgctcgtttggctggaatacctgcctctgtgcttcaa
actgccatggcaaaatcaagtgaatttgaagctggttatgggaagcgcaagcatgaaagt
gaaggtgagcttccagattttatcaaggatctgctttgtgctactgagagatggagctgc
caaaaggatttccatgagaaaaatttaaatttactcagtgaattacaaaagagagctagg
ttgcttgtgctcgaaagctga
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