Elaeis guineensis (African oil palm): 105053260
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Entry
105053260 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
egu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105053260
03015 mRNA surveillance pathway
105053260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105053260
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105053260
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105053260
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cupin_NOL9
Lgt1_N
Motif
Other DBs
NCBI-GeneID:
105053260
NCBI-ProteinID:
XP_010932660
UniProt:
A0A6I9RUU4
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Position
10:complement(1320046..1332528)
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AA seq
386 aa
AA seq
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MNFSKPSKIQAVTLPMILTPPHKDLVAQAHNGSGKTTCFVLGMLSRVDPSKKIPQAICIC
PTRELAIQNQAVLLKMGKYTGITSMCAIPSDSANYIPISRRPPVTEQVVIGTPGTIKKWT
SAKKLPTRDVKILVFDEADHMLAEDGFKDDSERIMKEIRRSNDACQVLLFSATFNETVKA
FVSRVVRDANQIFVKKEDLTLEKVKQYKVQCPDELAKMEVIKDKIFEFGQKVGQTIIFVR
TRNSATMLHTELTKEGYECTSIQGALKQEDRDKIIQEFKVGLTRVLITTDLLARGFDQEQ
VNLVINFALPVKYDTPXEPDYEVYLHRVGRAGRFGRKGAVFNLLCTDTDRSLMEKIERHF
DLHIPEVPNWRSEEDFESALKDAGLL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaattttagtaagcccagcaagatccaggcggtaacccttccgatgatcctaacgccg
ccacacaaggacttggtggctcaggcccacaatggatctggaaagactacatgttttgtg
cttgggatgctgagccgagttgatccaagtaaaaagatcccacaagcaatctgcatatgc
cctaccagagagttggctatccagaatcaggcagttcttttgaagatgggaaagtatacg
ggtataacttcgatgtgcgctataccatcagactcggcaaattatatcccaatctcaaga
cgtccacctgtaactgagcaagtagttattggcactcctgggaccattaaaaagtggacg
tcagcaaagaagttgcctacacgggatgtgaaaatccttgtttttgatgaggctgaccat
atgttagctgaggatggctttaaggatgattctgaaagaatcatgaaggagattcgaaga
agcaatgatgcctgccaggtgctacttttctctgccacctttaatgaaactgtcaaggct
tttgtatctagggtggttagggatgcaaatcagatctttgtgaagaaagaagacctcaca
ttggaaaaagtgaagcagtacaaggtccaatgtccagatgaacttgcaaaaatggaagtg
ataaaggacaagatttttgaatttggacaaaaggtagggcagactattatatttgtccgg
acaaggaatagtgccaccatgctacacacagaattaaccaaggagggttacgagtgcacg
tcaattcaaggtgcactcaagcaggaagacagagacaagattatacaggaatttaaagtt
ggactaacccgtgtacttataaccactgaccttcttgctcgaggttttgatcaagaacag
gttaatttggttatcaactttgctcttcctgtaaaatatgatactcctngggaacctgat
tatgaagtttacctgcatagagttggtagagctggacgttttgggcgcaagggtgctgta
ttcaacttgttatgtactgacacggatagatctctgatggagaagattgagcgtcacttt
gatctccacattcctgaggttccaaactggaggagtgaagaggacttcgagtctgcactt
aaggatgcgggtttgctatag
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