Elaeis guineensis (African oil palm): 105053304
Help
Entry
105053304 CDS
T03921
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105053304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105053304
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105053304
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105053304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
105053304
NCBI-ProteinID:
XP_010932706
UniProt:
A0A6I9RUW5
LinkDB
All DBs
Position
10:16802251..16802994
Genome browser
AA seq
247 aa
AA seq
DB search
MSGPTDRISHDITVRELGANNRHEEFALIRDIVETLIHHVAVVVQYPGVVTRRVGTFDST
ADYDYQTLRDNVNLLRPIQIGLTFPDAAGDLPRFPPGGGCPCVWQFNLREFDVDADIADP
DAVELLRGYGVDFAKQREQGIGACDFGEFLMSTGAVLKGSDVEWITFDGGYDIGFLLRIL
TGRVLPETREEFFELVNIFFPTLYDVKHLSTFCDDDPGLVQVAELLGVENVGVCRQAGGD
SFSRSRL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcccaacggacagaatcagccacgatatcacggtccgggagctcggggcaaac
aaccgccatgaggagttcgccctgatccgcgacatcgttgagacattaatccaccacgtc
gccgtggtcgtccagtaccctggcgtcgtcactcgccgcgtcggcaccttcgacagcacc
gccgactacgactaccagaccctccgcgacaacgtcaacctcctccggcccatccagatc
ggtctcaccttccccgacgctgccggcgacctcccccgcttcccccccggcggtggctgc
ccctgcgtctggcagttcaacttacgggagttcgacgtcgatgctgacatcgccgaccct
gacgccgtcgagctcctccgcggatacggtgtcgactttgcgaagcagcgggagcagggg
atcggtgcctgtgactttggcgagttcttgatgtccaccggagccgtgctcaaaggctcc
gacgtcgagtggatcaccttcgatggtgggtatgatattggcttcctcctcaggatattg
acgggccgcgtgctccccgagacgcgggaagaattcttcgagctcgtcaacatcttcttc
ccgactctgtacgacgtcaagcacctgagcacattctgtgatgatgatcccgggctcgtc
caggtcgccgaactgttgggcgtggagaatgtcggagtttgccgccaggcgggcggtgac
agcttctcacgctcgcgtctttag
DBGET
integrated database retrieval system
