Elaeis guineensis (African oil palm): 105053566
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Entry
105053566 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105053566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105053566
03009 Ribosome biogenesis [BR:
egu03009
]
105053566
04131 Membrane trafficking [BR:
egu04131
]
105053566
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egu04147
]
105053566
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105053566
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
105053566
Membrane trafficking [BR:
egu04131
]
SNARE
SNARE associated proteins
Others
105053566
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105053566
Exosome [BR:
egu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105053566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Vps4_C
Viral_helicase1
NACHT
AAA_7
AAA_24
NB-ARC
TsaE
DUF815
Sigma54_activat
Zeta_toxin
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
105053566
NCBI-ProteinID:
XP_010933081
UniProt:
A0A6I9RVI6
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All DBs
Position
11:95275041..95286246
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AA seq
811 aa
AA seq
DB search
MASKGEASSSSDPKGAKKDFSTAILERKKAPNRLIVDEAINDDNSVVSMNPETMEKLQLF
RGDTILLKGKKRRDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCQDVKYGK
RVHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPE
YCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI
GVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA
EKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSI
DPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAA
LCTEAALQCIREKMDVIDLEDESIDAEVLNSMAVTNEHFKTALGTSNPSALRETVVEVPN
VSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN
ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDA
GGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGXLDQLIYIPLPDEASR
YQIFKACLRKSPVSKDVDLGALAKYTHGFSGADITEICQRACKYAIRENIEKDIERERRR
SENPEAMEEDEADEVAEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFR
FSERSETGAGAAGSDPFASTAAGADDDDLYN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaagggcgaggcctcctcttcttccgaccccaagggagcgaagaaggatttt
agcacggcgattcttgagcggaagaaggcgccgaacagattgatcgtcgacgaggcgatc
aacgatgacaattcggtggtgtcgatgaatccggagacgatggagaagctgcagctgttc
cgtggagataccatcctcttgaaggggaagaaacggagggacactgtttgcattgcactg
gctgatgatacatgcgaggagcccaagattaggatgaataaggttgttcggtcaaatctc
agagttaggctcggtgatgtagtttctgtccatcagtgccaggacgttaagtatgggaaa
cgggtccatatattgccaattgatgataccattgaaggagttactgggaacttatttgat
gcatatctgaagccatatttccttgaggcatatcgtcctgtaaggaaaggggatcttttc
cttgtcagaggagggatgaggagtgttgaatttaaggtgattgaaacagacccacctgag
tactgtgttgttgctccagacacagagatcttctgtgagggggagcctgtgaaaagggag
gatgaagaaagactcgatgaggtggggtatgatgatgtgggtggagtgcgaaaacaaatg
gctcagattagagaactggtagaacttcctctgagacacccccagctattcaagtccatt
ggtgtgaagccaccaaaaggtatattgctgtatggaccacctggttctggaaagactctg
atagccagagcagtagcaaatgagacaggtgcttttttcttctgcatcaatggcccagag
atcatgtcaaaacttgctggcgaaagtgagagcaatctgaggaaggcttttgaggaagca
gagaaaaatgcaccgtcaatcatttttatcgatgagattgactcaattgctccaaagcga
gaaaaaactcatggagaagttgaaaggcgcattgtttctcagctattgacattaatggac
ggattgaaatcccgagcgcatgtgattgttattggtgctactaatcgacccaatagtatt
gatccagctcttaggaggtttgggcgatttgacagggaaattgacattggtgtgcctgat
gaagttggacgtttggaggtccttcgtattcatacaaagaacatgaagctagctgaagat
gttgatttggaaagaattgctaaagacacacatggatatgttggtgctgatctggcagcc
ctttgcactgaagctgcccttcagtgcatacgtgaaaagatggatgttattgatttagag
gatgaatctatagatgccgaggtactcaactccatggcagttaccaatgagcattttaag
actgctcttggaaccagcaatccatctgcacttcgtgaaactgttgttgaagtccccaat
gtttcttgggatgatattggcgggcttgagaatgtcaagagggagttgcaagagactgtt
caatatccagttgagcatcctgagaagtttgagaagtttggaatgtctccctccaaggga
gtgttgttctatggacctcctggttgtgggaagaccctattggctaaggcaattgctaat
gaatgccaagcaaactttatcagtgtcaagggtcctgaactgcttaccatgtggtttggt
gagagtgaagcaaatgtacgtgaaatctttgacaaggctcgtcaatctgcaccatgtgtc
ctcttttttgatgagcttgattcgattgcaactcagaggggaagcagtgttggtgatgca
ggtggtgctgctgacagggttcttaaccagcttcttacagagatggatggcatgagtgcc
aagaaaactgtattcattattggagcaactaacaggcctgacattatagatccagcattg
cttaggccgggcngtcttgaccagttaatttatattccacttcctgatgaggcttctcgt
taccaaatattcaaagcttgcctgaggaagtcaccggtgtccaaagatgttgacctgggg
gcccttgctaagtacactcatggattcagtggtgcagatattacagaaatttgccaacgt
gcttgcaaatacgccattagagagaacattgagaaggacattgaaagggaaaggaggaga
agcgaaaatcctgaagccatggaggaagatgaagctgatgaagtagcggagatcaaacct
gctcacttcgaagagtcaatgaaatatgctcgcaggagtgtgagtgatgctgacattcgg
aaatatcaggcttttgcacagactttgcagcagtcaaggggatttggcagtgagttccgc
ttctcagaacgctcagaaactggagctggggctgctggatctgatccctttgcatctaca
gctgctggggccgatgatgatgatttatacaattag
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