Elaeis guineensis (African oil palm): 105053735
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Entry
105053735 CDS
T03921
Name
(RefSeq) polyadenylate-binding protein 7
KO
K13126
polyadenylate-binding protein
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03015
mRNA surveillance pathway
egu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105053735
09123 Folding, sorting and degradation
03018 RNA degradation
105053735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105053735
03041 Spliceosome [BR:
egu03041
]
105053735
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105053735
mRNA cycle factors
Stress granule specific factors
105053735
Spliceosome [BR:
egu03041
]
Complex C
Other components
Complex C specific factors
105053735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_5
RRM_10
RRM_occluded
RRM_RdRP1_2
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
105053735
NCBI-ProteinID:
XP_010933305
UniProt:
A0A6I9RVK7
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All DBs
Position
2:complement(90773926..90786695)
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AA seq
628 aa
AA seq
DB search
MAVPPTVPVPALYVGDLHGEVTDADVFALFSTVGALTTVRVCRDSATGRSLGYGYVNYIS
AQDAKHALVKLNHSVLNGKPIRIMWSHRDPDARNSGVGNLFVKNLSDSISNAWLHQMFGK
FGTILSCKVATDDDGNSRGYGFVQFDKQESAESAIEALNGTTVAGKQIYVGTFIKKSERV
VLSPEAKYTNLYMKNLDQDITEELIELKFSEFGKISNVKIAKDDNGNSKGFGFVNFESPD
SAKRAVEAMNGVQLGSKTLYVARAQKKAERRQILRHLYEEKRNEQIRKSMASNVYVKNID
DTVDDDALRERFSQCGSITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTLHGCMFYGK
PLYVAIAQRKEERQAQLQLQYAQRMAGLTGSSTAVMPAGYPHLYYTPPGVVPQIPPRQGL
VYQPFGLSPGWRPSGFVPPSGPAFQPMPLPVMPNTPRQHRQNRGRMNGPSLPQSGHPVPY
LPHMQRANHLNSSKDSNSQQRFGQTKYVPNGRQREMNHGSMVPPGAPNLQGTMTLSSMLA
AATPQQQKQMLGERLFPLVEKLKFDLAAKITGMLLEMDNSELLLLLESPESLAAKVEEAV
EVLKLSKTNVGGQESLHPNYFSNEVAVN
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcctccgacagtcccggtgccggcgctctacgtcggggacctccacggggaa
gtgacggacgcggacgtcttcgctctcttctccaccgtcggggctctgacgaccgttcgc
gtctgccgcgattccgccaccggacgctcccttggatacggctacgtcaactacatttcc
gcccaagatgccaagcatgctctggtgaagttgaatcacagtgttttgaatggcaaaccg
ataagaattatgtggtcccatcgggatcccgatgcaaggaacagcggggttggaaatctg
tttgtgaagaacctaagtgactccatcagtaatgcatggcttcatcagatgtttgggaaa
tttgggaccattttgtcgtgtaaagttgctacggatgatgatgggaatagcagagggtat
ggatttgttcaatttgacaaacaagagtcggcagaatctgccattgaggcactcaatgga
accactgtcgcaggcaagcaaatatatgttggaactttcatcaaaaagagtgaacgtgta
gtgctgagccctgaagctaaatatactaacctgtacatgaagaacctggaccaggacata
acagaagaacttattgaactgaagttctctgagtttggtaaaatttctaatgtaaaaatt
gcgaaagatgataatgggaactcaaagggatttgggtttgtgaactttgaaagccctgat
agtgccaaaagggcagtggaagctatgaatggagttcaactcggatccaagaccctgtat
gtggcaagggctcagaagaaagcagaacggcgacaaattttgcggcatttgtatgaggaa
aagcgtaacgagcagatcaggaaaagcatggcctcaaatgtctatgtcaaaaatattgat
gataccgttgatgatgatgctctgcgggaacgtttcagtcaatgtggcagcatcacttct
gcaaaaattatgcgtgacgataaaggaataagcaaaggatttgggtttgtatgctttagc
actccagaggaagccaacaaagctgtgaacactctgcatggatgtatgttctacggaaag
cctttgtatgttgcaattgcccaaaggaaagaggaaagacaggctcagttgcagcttcaa
tatgctcagcgcatggcaggattaaccggttcttcaactgctgttatgcctgctggatat
cctcatctttactacactcctcctggtgttgtcccacaaattcctccaaggcaaggcctt
gtttatcagccctttggacttagtcctggatggaggcctagtggatttgttcctccatca
gggccagctttccaaccaatgccgcttccagtgatgccaaatactccaaggcaacataga
caaaataggggtcggatgaatggaccttcactgcctcagtctggacaccctgttccatac
ttgccgcatatgcaacgggcaaaccatttgaattcttccaaagattctaacagccagcag
cgatttgggcagaccaagtatgtgccaaatggacgccagcgtgaaatgaatcatggatca
atggttccaccaggtgctccaaacttgcaaggtacaatgacgctcagcagcatgcttgct
gctgctacaccacagcaacaaaaacaaatgcttggcgaacgccttttccccttggttgaa
aaacttaagtttgatcttgctgctaaaattactggaatgctgttggagatggacaattct
gaattgcttctgctgttggagtcaccagaatcattggctgccaaagtggaagaagcagtc
gaagtgctgaagctatctaaaaccaacgtaggtggtcaagagtctctccaccccaattac
ttttcaaatgaggttgccgtcaactga
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