KEGG   Elaeis guineensis (African oil palm): 105053817
Entry
105053817         CDS       T03921                                 
Name
(RefSeq) protein RDM16 isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105053817
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egu03041]
    105053817
Spliceosome [BR:egu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    105053817
SSDB
Motif
Pfam: PRP3 Prp3_C SabA_adhesion
Other DBs
NCBI-GeneID: 105053817
NCBI-ProteinID: XP_010933423
UniProt: A0A6I9RVU2
LinkDB
Position
2:90569907..90579143
AA seq 961 aa
MDKDRSSRKSRDDRERDRDSSKDHHHGDRDRDRDHKHRRHHGEEKHHGSRDERHGDEDRR
YRSRDDSPRDLEPSRDKRHRDDNRRHRRSREDSPSDLEWRRERSTSRATDSVERDRVSRE
QSMERRHHSSSSRKRKEHGGDEEELNKNDKRVRVSDEGREEKKERRRFEDRAAEDSSDLN
GVYKEERVSKDRRKEDGLRAMEEYREENMVKEEVMSDAEIKKKRKEGRRFSDSVKSGEKR
DEDEAKAVDRKEVRGEWKFKDRVKEEDLGTVDEAKSSVFSFNSKHKSVNEQMINGDQSYM
AMEKSGSTTNVVAQEPLTVASMVSISTAASHPLPTKVSSITTTNENEGVSIRSDEVPGKS
STDGTATSVAGKSGSLSLDALAKAKKALQMQKELAEKLKKIPMLNKAASTSTENFKVVSD
KDGLKSPPSGLGAQAVSTGPLTSVSATPVQAMPGLPVGVTPSEKASAAGGIGILPGLTTP
NIEAVKRAQELAAKMGFRQDPEFAPLINMFPGSSSTDVAAPQRPAKAPVLRLDAQGREID
EYGNVINMPKLTNLSTLKVNINKQKKEAFQIIKPDLDASAQSNPYFDEGMGINKTKLLRP
KRMTFQFVEEGKWSKEAEMIKFKSQFGEAQAKELKMKQSQLAKAKADPDSNPNLIAVGVR
LTKEKKKEEIPEIEWWDKPILPSGSYDDVANVKLNMDRITIYIEHPLPIEPPAEPAPPPP
QPLKLTKKEQKKLRTQRRLAKERDRQEMIRQGLIEPPKPKIKMSNLMKVLGSEATQDPTK
LEMEIRSAAAEREQAHVDRNIARKLTPAERREKKERRLFDDPNTLETLVSVYKIKDLSHP
QTRFKVDVNAQENRLTGCAVISDGVSVVVVEGGRKPVKRYGKLMLKRINWAAAVTNEDEA
EDSDAPANSCVLVWQGSVAKPSFNRFLVHQCRSEAAARKVFADAGVPHYWDLAINYSEEL
L
NT seq 2886 nt   +upstreamnt  +downstreamnt
atggacaaggatcgatccagccggaaatcccgagacgaccgcgaaagggaccgagattcc
agcaaggatcaccaccacggcgaccgtgatcgcgaccgggatcacaagcaccggcgccac
cacggcgaagagaagcaccatggatcgagggacgagcggcacggcgacgaagatcgtcgc
taccgctcccgggacgattctccccgcgatctcgagccgagccgggacaagcggcaccgc
gacgataaccgccgccaccgccgctcccgggaggactccccttccgatctggagtggagg
cgtgagcggtcgacgagtagggctacggattcggtcgagcgggatagggtttcccgcgag
cagtccatggagaggcgccaccactcgtcctcttcgaggaagaggaaggagcacggagga
gatgaggaagaattgaacaagaatgacaagcgggttagggtttctgatgaggggagagag
gagaagaaggaaaggaggcgttttgaggaccgggctgcagaggattcgagtgatctgaat
ggtgtctacaaagaagagagggtttcgaaggatagaaggaaagaagatggattgagggcc
atggaagaatatagggaggagaatatggtgaaagaagaggtcatgagcgatgcggaaatc
aagaaaaagcggaaagaagggaggagatttagcgatagtgtcaagtcaggggagaagaga
gatgaagatgaagctaaagcagttgataggaaagaagtgagaggggaatggaaatttaag
gatagggtcaaggaagaagatttggggactgtggatgaggcaaaatcatcagttttttcc
ttcaattcaaaacataaatcagtcaacgagcaaatgattaatggtgatcagagctacatg
gccatggagaagagtggttctacaactaatgttgttgctcaggaaccgctcactgtggca
tcaatggtttctattagcactgctgcttctcatccccttcctaccaaggtatcttcaatt
actaccaccaatgaaaatgagggagttagtattagatctgatgaggttcctggaaaatcc
agtacagatgggacagcaacttcagtcgctggcaaaagtggcagcctgtctcttgatgct
ttagcaaaagctaaaaaggctttacaaatgcagaaggaactagcggaaaagctgaagaag
attcctatgctaaataaagctgctagtacaagcactgagaacttcaaggtagtatctgac
aaggatgggcttaagtctcctccatcaggtttaggagcacaagctgtctctactgggcct
ttgacttctgtctctgcaacccctgttcaggcaatgccaggattacctgttggggtaaca
ccgtctgaaaaggcatctgctgcaggtggcattggcattcttcctggcctcacaacacct
aatattgaggctgtaaagcgagcacaagagcttgctgctaagatgggatttcgccaggac
ccagagtttgcacctcttataaatatgtttcctggatcatcatcaactgatgtggctgca
cctcagagacctgccaaggctcctgttctgcgcttagatgcccagggtagagaaattgat
gaatatgggaatgtcattaatatgcctaaattgacaaatctcagtactctgaaggtcaat
atcaacaaacagaagaaagaagcatttcaaataatcaaaccagatttagatgctagtgca
caatcgaatccttattttgatgaggggatgggtattaacaaaacaaagctcttgaggccc
aaaaggatgacatttcagtttgtagaggaaggcaaatggtcaaaagaggcagagatgata
aaatttaagagtcaatttggagaagcgcaagcaaaggaattgaaaatgaagcagtcacag
cttgcaaaggccaaggctgatcctgacagtaacccgaatttgatagcagtaggggtgagg
cttactaaagagaagaagaaggaagagatccctgaaatagagtggtgggacaagccgatt
ttaccttcaggttcctatgatgacgtcgccaatgtgaaactgaacatggacaggatcaca
atatatatagagcacccgcttccgattgagcccccagcagagcctgccccaccaccgcca
caacctctgaagcttacaaagaaggagcagaagaaactaaggacacagaggcgccttgca
aaggaaagagacaggcaagaaatgatcaggcagggcctgatagagcctcccaagcccaag
attaagatgagcaatctaatgaaggtcctaggctctgaagcaactcaagaccccacaaag
cttgaaatggaaattcgtagtgctgctgctgagcgagagcaagctcatgttgatagaaac
attgctcgcaagctcacccctgcagaacgtcgtgagaaaaaagagaggaggctctttgat
gatccgaacacacttgagactcttgtttctgtgtacaagattaaagacctttcacaccca
caaacacgcttcaaagttgatgtgaatgcccaagagaaccggctgactggatgtgctgtg
atatcggatggcgtcagtgttgtggttgtggaagggggcagaaagccagttaaaaggtat
gggaagctgatgctgaaacggataaactgggcagctgctgtcaccaatgaggatgaagct
gaggactcagacgctcctgccaatagttgtgttttggtatggcagggtagtgttgcaaaa
cctagcttcaataggtttcttgttcaccagtgcagaagcgaggctgctgccaggaaagtg
tttgcagatgctggggttccacactattgggatctggctatcaattactcggaagaactg
ttgtaa

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