Elaeis guineensis (African oil palm): 105053817
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Entry
105053817 CDS
T03921
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105053817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105053817
Spliceosome [BR:
egu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105053817
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
105053817
NCBI-ProteinID:
XP_010933423
UniProt:
A0A6I9RVU2
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Position
2:90569907..90579143
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AA seq
961 aa
AA seq
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MDKDRSSRKSRDDRERDRDSSKDHHHGDRDRDRDHKHRRHHGEEKHHGSRDERHGDEDRR
YRSRDDSPRDLEPSRDKRHRDDNRRHRRSREDSPSDLEWRRERSTSRATDSVERDRVSRE
QSMERRHHSSSSRKRKEHGGDEEELNKNDKRVRVSDEGREEKKERRRFEDRAAEDSSDLN
GVYKEERVSKDRRKEDGLRAMEEYREENMVKEEVMSDAEIKKKRKEGRRFSDSVKSGEKR
DEDEAKAVDRKEVRGEWKFKDRVKEEDLGTVDEAKSSVFSFNSKHKSVNEQMINGDQSYM
AMEKSGSTTNVVAQEPLTVASMVSISTAASHPLPTKVSSITTTNENEGVSIRSDEVPGKS
STDGTATSVAGKSGSLSLDALAKAKKALQMQKELAEKLKKIPMLNKAASTSTENFKVVSD
KDGLKSPPSGLGAQAVSTGPLTSVSATPVQAMPGLPVGVTPSEKASAAGGIGILPGLTTP
NIEAVKRAQELAAKMGFRQDPEFAPLINMFPGSSSTDVAAPQRPAKAPVLRLDAQGREID
EYGNVINMPKLTNLSTLKVNINKQKKEAFQIIKPDLDASAQSNPYFDEGMGINKTKLLRP
KRMTFQFVEEGKWSKEAEMIKFKSQFGEAQAKELKMKQSQLAKAKADPDSNPNLIAVGVR
LTKEKKKEEIPEIEWWDKPILPSGSYDDVANVKLNMDRITIYIEHPLPIEPPAEPAPPPP
QPLKLTKKEQKKLRTQRRLAKERDRQEMIRQGLIEPPKPKIKMSNLMKVLGSEATQDPTK
LEMEIRSAAAEREQAHVDRNIARKLTPAERREKKERRLFDDPNTLETLVSVYKIKDLSHP
QTRFKVDVNAQENRLTGCAVISDGVSVVVVEGGRKPVKRYGKLMLKRINWAAAVTNEDEA
EDSDAPANSCVLVWQGSVAKPSFNRFLVHQCRSEAAARKVFADAGVPHYWDLAINYSEEL
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggatcgatccagccggaaatcccgagacgaccgcgaaagggaccgagattcc
agcaaggatcaccaccacggcgaccgtgatcgcgaccgggatcacaagcaccggcgccac
cacggcgaagagaagcaccatggatcgagggacgagcggcacggcgacgaagatcgtcgc
taccgctcccgggacgattctccccgcgatctcgagccgagccgggacaagcggcaccgc
gacgataaccgccgccaccgccgctcccgggaggactccccttccgatctggagtggagg
cgtgagcggtcgacgagtagggctacggattcggtcgagcgggatagggtttcccgcgag
cagtccatggagaggcgccaccactcgtcctcttcgaggaagaggaaggagcacggagga
gatgaggaagaattgaacaagaatgacaagcgggttagggtttctgatgaggggagagag
gagaagaaggaaaggaggcgttttgaggaccgggctgcagaggattcgagtgatctgaat
ggtgtctacaaagaagagagggtttcgaaggatagaaggaaagaagatggattgagggcc
atggaagaatatagggaggagaatatggtgaaagaagaggtcatgagcgatgcggaaatc
aagaaaaagcggaaagaagggaggagatttagcgatagtgtcaagtcaggggagaagaga
gatgaagatgaagctaaagcagttgataggaaagaagtgagaggggaatggaaatttaag
gatagggtcaaggaagaagatttggggactgtggatgaggcaaaatcatcagttttttcc
ttcaattcaaaacataaatcagtcaacgagcaaatgattaatggtgatcagagctacatg
gccatggagaagagtggttctacaactaatgttgttgctcaggaaccgctcactgtggca
tcaatggtttctattagcactgctgcttctcatccccttcctaccaaggtatcttcaatt
actaccaccaatgaaaatgagggagttagtattagatctgatgaggttcctggaaaatcc
agtacagatgggacagcaacttcagtcgctggcaaaagtggcagcctgtctcttgatgct
ttagcaaaagctaaaaaggctttacaaatgcagaaggaactagcggaaaagctgaagaag
attcctatgctaaataaagctgctagtacaagcactgagaacttcaaggtagtatctgac
aaggatgggcttaagtctcctccatcaggtttaggagcacaagctgtctctactgggcct
ttgacttctgtctctgcaacccctgttcaggcaatgccaggattacctgttggggtaaca
ccgtctgaaaaggcatctgctgcaggtggcattggcattcttcctggcctcacaacacct
aatattgaggctgtaaagcgagcacaagagcttgctgctaagatgggatttcgccaggac
ccagagtttgcacctcttataaatatgtttcctggatcatcatcaactgatgtggctgca
cctcagagacctgccaaggctcctgttctgcgcttagatgcccagggtagagaaattgat
gaatatgggaatgtcattaatatgcctaaattgacaaatctcagtactctgaaggtcaat
atcaacaaacagaagaaagaagcatttcaaataatcaaaccagatttagatgctagtgca
caatcgaatccttattttgatgaggggatgggtattaacaaaacaaagctcttgaggccc
aaaaggatgacatttcagtttgtagaggaaggcaaatggtcaaaagaggcagagatgata
aaatttaagagtcaatttggagaagcgcaagcaaaggaattgaaaatgaagcagtcacag
cttgcaaaggccaaggctgatcctgacagtaacccgaatttgatagcagtaggggtgagg
cttactaaagagaagaagaaggaagagatccctgaaatagagtggtgggacaagccgatt
ttaccttcaggttcctatgatgacgtcgccaatgtgaaactgaacatggacaggatcaca
atatatatagagcacccgcttccgattgagcccccagcagagcctgccccaccaccgcca
caacctctgaagcttacaaagaaggagcagaagaaactaaggacacagaggcgccttgca
aaggaaagagacaggcaagaaatgatcaggcagggcctgatagagcctcccaagcccaag
attaagatgagcaatctaatgaaggtcctaggctctgaagcaactcaagaccccacaaag
cttgaaatggaaattcgtagtgctgctgctgagcgagagcaagctcatgttgatagaaac
attgctcgcaagctcacccctgcagaacgtcgtgagaaaaaagagaggaggctctttgat
gatccgaacacacttgagactcttgtttctgtgtacaagattaaagacctttcacaccca
caaacacgcttcaaagttgatgtgaatgcccaagagaaccggctgactggatgtgctgtg
atatcggatggcgtcagtgttgtggttgtggaagggggcagaaagccagttaaaaggtat
gggaagctgatgctgaaacggataaactgggcagctgctgtcaccaatgaggatgaagct
gaggactcagacgctcctgccaatagttgtgttttggtatggcagggtagtgttgcaaaa
cctagcttcaataggtttcttgttcaccagtgcagaagcgaggctgctgccaggaaagtg
tttgcagatgctggggttccacactattgggatctggctatcaattactcggaagaactg
ttgtaa
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