Elaeis guineensis (African oil palm): 105053983
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Entry
105053983 CDS
T03921
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egu04131
]
105053983
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egu04147
]
105053983
Membrane trafficking [BR:
egu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
105053983
Exosome [BR:
egu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105053983
Exosomal proteins of bladder cancer cells
105053983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR19_1st
Fis1_TPR_C
ENTH
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
105053983
NCBI-ProteinID:
XP_010933642
UniProt:
A0A6I9RWT7
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Position
11:complement(116176907..116183414)
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AA seq
1217 aa
AA seq
DB search
MLTKFETKSNRVKGLTFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHDEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPSLPLIVSGADDRQLKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDVIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILAAHP
ELNLLAAGHDSGMIVFKLERERPAFSVSGDTLYYVKDRFLRFYEFSAQKDNQVVPIRRPG
SVSLNQGPRTLSYSPTENAVLLCSDADGGSYELYIVPRDSAGRADYVQEARKGSGGSAVF
VARNRFAVLDKSNNQALVKNLKNEIVKKSPLPVATDAIFYAGTGNLLCRAEDRVVIFDLQ
QRLVLGELQTPSVKYVVWSSDMESIALLSKHAIVIASKKLTHRCTLHETIRVKSGAWDEN
GVFIYTTLNHIKYCLPNGDSGIVRTLDVPIYITKVSGSSIYCLDRDGKNRVISIDATEYI
FKLALLRKRYDHVMSMIRHSQLCGQAVIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDYWYRLGIEALRQGNTSIMEYAYQRTKNFERLSFLYLVTGNMEKLSK
MLRIAEIKNDVMGQFHNAMYLGDVQERVTILERAGQLPLAYVTAATHGLAEVADRLAAEL
GDNVPFIPERKVSSLLMPSKPLMCSGDWPLLRVMRGIFEGELDNLGRAEHEEEEATGADW
GDEDLDIVDVEGVIQNGDIVAEVEDGEANEENDEEGGWDLEDLELPPDMETPKASTNARS
SLFVAPTPGMPVSQIWIQKSSLAGEHVAAGNFDTAVRLLSRQLGIKNFAPLRPLFVDLYE
GSHTYLHAFATAPVISIAVEKGWTESASPNVRGPPALVFKFSQMDEKLKAAYRVTTEGKF
PEALRQFLNILHTIPLLVVDSRREVDEVKELIQIAREYVLGLKMEVKRKEIKDNAIRQQE
LAAYFTNCKLQKIHMRLVVASAMSSCYRGGNFATAANFARMLLENSPTEAQAKKARQVLQ
ACGDKKDTSQLNYDYRNPFVVCGATFVPIYRGQKDISCPYCGARFVPAMEGQICAVCELS
VVGADASGLLCSPTQTR
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagttcgagaccaagagcaatcgtgtgaaggggctgaccttccacagcaag
cggccatggatcctcgccagcctccacagcggcgtcatccagctatgggactaccggatg
ggcaccctcatcgaccgattcgacgagcacgatgggcctgtgcgcggcgttcacttccat
aaatctcagcccctcttcgtctccggaggagatgattacaagatcaaggtctggaattat
aagacccatcggtgcctatttacccttcttgggcatctcgattacattcggacagtccaa
tttcatgatgagtatccatggattgtcagtgccagcgatgatcaaactattagaatctgg
aactggcagtctcgcacctgcatttcagtgttaacagggcacaatcactatgtcatgtgt
gcctcattccatccaaaggaggacctggttgtatcagcttccctggatcagacggttcgg
gtttgggatattggtgcgctgaggaagaagactgtgtcaccagctgatgacatcttgcgg
ctgagccagatgaacactgatctgtttggtggagttgatgctgttgtcaagtatgtcttg
gaaggtcatgatcgtggagtcaactgggcatcatttcatccaagcctgcctcttatcgtg
tctggagcagatgatcgacagttgaaactatggcgaatgaatgatacaaaggcttgggaa
gtggacacattgagagggcatatgaataatgtctcttgtgtaatgttccacgcaaagcag
gatgttattgtgtcaaactcggaggacaaaagcattcgcatttgggatgctacaaaacgc
actggtattcagacatttcgccgtgaacatgaccgtttctggattcttgctgcacatcca
gaactgaaccttcttgcagctggtcatgacagtggtatgattgtttttaaattggagaga
gagcgccctgctttctctgtgagtggagatactctctactatgttaaagatcggtttttg
cggttctacgagttttcagcccaaaaggataatcaagtggttccaattagaaggcctggt
tctgtcagcttgaatcagggacccagaacactgtcttacagccctacagagaatgctgtc
ttgctctgctctgatgcagatgggggttcatatgaactctatattgttcccagggattct
gccggaagggctgattatgtgcaggaagcaaggaagggatctgggggctcagctgttttt
gtagctcgcaacaggtttgctgttctcgacaagagtaacaatcaagcattggtgaagaac
cttaagaatgagattgttaaaaagagccctcttcctgttgctactgatgcgatattttat
gctgggacaggcaatctgctgtgtagggctgaggatagggtggtcatctttgatcttcaa
cagaggctggttcttggggaacttcagaccccatctgtcaaatatgttgtttggtcaagt
gacatggagtctattgccttgttgagcaaacatgctatagtcattgctagcaagaaactt
acgcaccgctgcacgcttcatgagaccatccgtgtgaaaagtggtgcctgggatgagaat
ggtgtttttatttatacaaccttaaaccatattaagtactgccttcctaatggggacagt
ggaattgtaagaacccttgatgttcctatttacatcaccaaggtttctggtagcagtatc
tactgcttggatcgtgatgggaagaatcgggttatatcaattgatgctacagaatacatt
ttcaagcttgcccttttgcgaaaaagatacgaccatgtgatgagcatgataaggcattca
cagctatgcggacaggccgtgatcgcatatctgcaacagaaaggtttccctgaagtagct
ctccattttgtcaaagatgagaggacccggttcaacctggctcttgaaagtggtaacatt
cagattgccgttgcttcagctaaggagatagatgagaaagattattggtataggttgggc
attgaggcactccgacagggaaacaccagtattatggaatatgcataccagaggactaaa
aactttgagaggctatcgtttctctatcttgtaacagggaacatggaaaaactgtccaaa
atgttgaggatagctgagattaaaaatgatgtgatgggccagttccacaatgctatgtat
ctaggtgatgttcaggaacgtgtcacgatcttggagagagctggccagttgcctcttgca
tatgtcacagctgccactcatgggcttgctgaagttgctgacagacttgcagctgaattg
ggagataatgttccctttatacctgaacgaaaagtcagttctcttctgatgccttcaaag
ccactcatgtgcagtggtgattggccattgttaagggtgatgcgaggtatttttgaaggt
gagttggataaccttgggagggcagaacatgaggaagaagaagctactggtgctgactgg
ggtgatgaggatttggatattgttgatgttgaaggcgtgattcagaatggcgatatagtt
gcagaggttgaggacggtgaagcaaatgaagagaatgatgaggaaggagggtgggacctt
gaagatttggaattaccaccagatatggaaacacccaaagctagcaccaatgctcgttca
tctttgtttgttgctcccactcctggcatgccggtaagccaaatttggattcagaaatcc
tctctggcgggggagcatgtggcagctggaaatttcgacaccgctgtgcgcctgcttagc
aggcaattgggcataaagaactttgctcccttaaggccattgtttgtggatctttacgaa
ggtagccacacatatcttcatgcttttgcgacagcaccggtgatatcaattgctgttgag
aaggggtggaccgagtctgccagtcctaatgtcaggggcccaccagcccttgtttttaag
ttttcacagatggatgagaagcttaaggctgcttaccgagtcacaacagaaggaaagttt
ccagaggctttgcggcaatttctcaatattttgcacactatcccacttttggtcgtggac
tcgaggagggaagttgatgaagtgaaggaacttattcagatagcgagagagtatgtcctg
ggcttgaagatggaagtcaaaagaaaggaaatcaaagacaatgcaattcgtcagcaggag
ttggcagcctacttcaccaattgtaagcttcaaaagattcacatgagacttgtggtcgca
agcgcaatgagtagctgttacaggggagggaactttgctacagcagccaattttgctagg
atgcttctcgagaacagtcctactgaagcccaagcgaagaaggctaggcaagtgttgcag
gcttgcggtgataaaaaggataccagccagctgaattatgattacaggaatccatttgta
gtttgtggggctacttttgttccaatctaccgtgggcagaaggatatttcctgcccttat
tgtggggctcgctttgtgccagctatggaggggcagatttgtgcggtttgtgagctttcg
gtggtgggtgcagatgcatcaggtcttctctgttctcccacacagacaagataa
DBGET
integrated database retrieval system