Elaeis guineensis (African oil palm): 105053984
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Entry
105053984 CDS
T03921
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egu04131
]
105053984
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egu04147
]
105053984
Membrane trafficking [BR:
egu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
105053984
Exosome [BR:
egu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105053984
Exosomal proteins of bladder cancer cells
105053984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
TPR_COPA_B
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Fis1_TPR_C
Beta-prop_At4g14310
ThaI
ENTH
Motif
Other DBs
NCBI-GeneID:
105053984
NCBI-ProteinID:
XP_010933645
UniProt:
A0A6I9RXU2
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Position
11:complement(116162320..116168802)
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AA seq
1217 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHDEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPSLPLIVSGADDRQLKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILAAHP
EMNLLAAGHDSGLIVFKLERERPAFSVSGDTLYYVKDRFLRFYEFSAHKDNQVVPIRRPG
SVSLNQGPRTLSYGPTENAVLLCSDVDGGSYELYIVPKDSAGRGDCVLEARKGSGASAVF
IARNRFAVLDKSNNQALVKNLKNEIVKKSSLPVATDAIFYAGTGNLLCRAEDRVVIFDLQ
QRLVLGELQTPSVKYVVWSSDMESVALLSKHAIVIASKKLTHRCMLHETIRVKSGAWDEN
GVFIYTTLNHIKYCLPNGDSGIVRTIDVPIYITNVSGSSIYCLDRDGKNRVISIDATEYI
FKLALLRKRYDHVMSMIRHSQLCGQAVIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDYWYRLGIEALRQGNTSIMEYAYQKTKNFERLSFLYLVTGNMEKLSK
MLRIAEIKNDVMGQFHNAMYLGDVQERVTILERTGHLPLAYVTAATHGLAEVADRLAAEL
GDNVPSVPEGKVSSLLMPPQPLMCSGDWPLLRVMRGIFEGELENLGRAGHEEEEATGADW
GDEDLDIVDVEGLIPNGDIVAEVEDGEAHEENDEEGGWDLEELELPPDMETPKASTNARS
PLFVAPTPGMPVSQIWVQKSSLAGDHVAAGNFDTAMRLLSRQLGIKNFAPLKPSFVDLYE
GSHTYLRAFPTAPVILIAVEKGWTESASPNVRGPPELVFKFSQMDEKLKAAYRVTTEGKF
PEALRQFLGILHTIPLLVVDSRREVDEVKELIEIVREYVLGLKMEVQRKEIKDDAIRQQE
LAAYFTNCKLQKIHMRLVLASAMSSCYRGGNFATAANFARMLLENSPTEAQSKKARQVLQ
ACSDKKDTNQLNYDYRNPFVVCGATFVPIYRGQKDICCPYCGARFVPATEGQICAVCELA
VVGADASGLLCSPMQTR
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagacgaagagcaatcgggtgaaggggctgagtttccacagcaag
cggccatggatcctcgccagcctacacagcggcgtcatccagctatgggactaccggatg
ggcaccctcatcgaccgattcgacgagcacgacggccctgtgcgcggtgttcattttcat
aaatctcagccgctcttcgtctccggaggagatgattacaagatcaaggtctggaattac
aagacccatcggtgcctatttacccttcttgggcatctcgattacattcggacagtccaa
tttcatgatgagtatccatggattgtcagtgcaagcgatgatcaaacaattagaatctgg
aactggcagtctcgcacctgcatttcagtgttaacagggcacaaccactatgtcatgtgt
gcctcgttccatccaaaggaggacctggttgtatcagcttccctggatcagacggtccgg
gtttgggatattggtgcgctgaggaagaagacggtctctccagctgatgacatcttgcgc
ctaagccagatgaacaccgatctgtttggtggagttgatgctgttgtcaagtatgtcttg
gaaggtcatgatcgtggagtcaactgggcctcatttcatccaagcttgcctcttattgtg
tctggagcagatgatcggcagctgaagctatggcgaatgaatgatacgaaggcttgggaa
gtggacacattgagagggcacatgaataatgtctcttgtgtaatgttccatgcaaagcag
gatattattgtgtcaaactcagaggacaaaagcatccgcatttgggatgctacaaaacgc
actggtattcagacatttcgccgtgagcatgaccgtttctggattcttgctgcacatcca
gaaatgaaccttctggcagctggtcatgacagtggtttgattgtttttaaattggagaga
gagcgccctgctttctctgtgagtggagatactctctactatgtcaaagatcggtttttg
cggttctatgagttttcagcccacaaggataatcaagtggttccaattagaaggcctggt
tctgttagcttgaatcaggggcccagaacactgtcttacggccccacagagaatgctgtt
ttgctctgctctgatgtggatgggggttcatatgaactctatattgttcccaaggattct
gccggaaggggtgattgtgtgctggaagcaaggaagggatctggggcctcagctgttttc
atagctcgcaacaggtttgcagttctcgacaagagtaacaatcaagcattggtgaagaac
cttaagaatgagattgttaaaaagagttctcttcctgttgctactgatgcaatattttat
gccgggacaggcaacctattgtgtagggccgaggatagggtggtcatctttgatctccaa
cagaggctggttcttggggaacttcagaccccatctgtcaaatatgttgtttggtcaagt
gacatggagtctgttgccttgttgagcaaacatgctatagtcattgctagcaagaaactt
acacaccgctgcatgcttcatgagaccatccgtgtgaaaagtggtgcctgggatgagaat
ggcgtctttatttatacaaccttaaaccatattaagtactgccttcctaatggggacagt
ggaatcgtgagaaccatcgatgttcctatttacataaccaatgtttctggtagcagtatc
tactgcttggatcgtgatgggaagaatcgggttatatcaattgatgctacagaatacatt
ttcaagcttgcccttttgcgaaaaagatacgaccatgtgatgagcatgataaggcattca
cagctatgtggacaggcagtgatcgcgtatctgcaacagaaaggtttcccggaagtagct
ctccattttgtcaaagatgagagaacccgattcaacctggctcttgaaagtggtaacatt
cagattgccgttgcttcagcaaaggagatagatgagaaagattactggtacaggttgggc
attgaggctctccgacagggaaacaccagtattatggaatatgcataccagaagactaaa
aactttgagaggctatcttttctctatcttgtaacagggaacatggaaaaactgtccaaa
atgttgaggatagctgagattaaaaatgatgtgatgggccagttccacaatgccatgtat
ctaggtgacgttcaggaacgtgtcacgatcttggagagaactggccatttgcctcttgca
tatgtcacggctgccactcatgggcttgctgaagttgctgacaggcttgcagctgaattg
ggagataatgttccctctgtacctgaaggaaaagtcagttctcttctgatgccacctcag
ccactcatgtgcagtggcgattggccattattaagggttatgcgaggtatctttgaaggt
gagttggagaatcttgggagggcaggacatgaggaagaagaagctactggtgctgactgg
ggtgatgaggatttggatattgttgatgttgaaggcttgattccgaatggtgatatagta
gcagaggttgaggatggtgaagcacatgaagagaatgatgaggaaggagggtgggacctc
gaagaattggaattaccaccagatatggaaacaccaaaagctagcaccaatgctcgttca
cctttgtttgttgctcctacaccaggcatgccagtaagccagatttgggttcagaaatcc
tctctggcaggggaccatgtggcagctgggaatttcgacactgccatgcgcctgcttagc
agacaactgggcataaagaactttgctcccttaaagccatcgtttgtggatctttatgaa
ggtagccacacatatcttcgtgcttttcctacagcaccagtgatattaattgctgttgag
aagggttggactgagtctgccagtcctaatgttaggggcccaccagaacttgtttttaag
ttttcacagatggatgagaagcttaaggctgcttaccgagtcacaacagagggaaaattt
ccagaggctttgcggcaatttctcggtatcctgcacactatcccacttttggtggtggac
tcgaggagggaagttgatgaagtgaaggagcttattgagatagtgagagagtatgtcctg
ggcttgaagatggaagtccaaagaaaggaaatcaaggacgatgcaattcgtcagcaggag
ttggcagcctacttcaccaactgtaagcttcaaaagattcacatgagactggtgcttgca
agcgcaatgagtagctgctataggggagggaactttgctacagcagccaattttgctagg
atgcttttggagaacagtcctactgaagcccaatcaaagaaggctaggcaggtgttgcag
gcttgcagcgataaaaaggataccaaccagctgaattatgattacaggaatccatttgta
gtttgtggggctacttttgttccaatctaccgtgggcagaaggatatttgctgcccgtat
tgtggggctcgctttgtgccagctacggaggggcagatttgtgctgtttgtgagctggca
gtggtgggtgcagatgcgtcgggtctactctgttctcccatgcagacaagataa
DBGET
integrated database retrieval system
