Elaeis guineensis (African oil palm): 105054427
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Entry
105054427 CDS
T03921
Name
(RefSeq) pre-mRNA-processing factor 39-1
KO
K13217
pre-mRNA-processing factor 39
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105054427
Spliceosome [BR:
egu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105054427
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
NRDE-2
Cir_Bir_Yir
Motif
Other DBs
NCBI-GeneID:
105054427
NCBI-ProteinID:
XP_073102134
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All DBs
Position
11:complement(121370259..121390459)
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AA seq
833 aa
AA seq
DB search
MEDSQAVVSQASSAADYSSTAHVPAEYPMTDSAAPSGGEGLVSSVPTAATDYALSDGTNL
DERNMYSQEPNSVEQNATYGMAYESKPDGGAAVASENAIGHETVAGISTHTTGYDSMNGG
AGELASYQPTGVVENGDLSNDVGGTVVQQPYEDVVYTAEEERLWNMVRANCLDFNSWTAL
IDETEKVAENDIIKIRKVYDAFLAEFPLCYGYWKKYADHEGRLDSVDKVVEVYERAVLAV
TYSVEIWLHYCTFAISTYEDLDTIRRLFERGLAYVGTDYGSHILWDEYIRYEESHQAWSH
LAMIYTRILEHPIQQLDRYYYCFKELAASRPLSEIRTPEEAAMAAATAETGGGQSLEGEV
RPDGVEQSPKPVSAGLTEAEELEKYIAIREEMYKKAKEFESKIIGFETAIRRPYFHVRPL
DDPELENWHTYLDFIERGDDFNKVVKLYERCLIACANYPEFWIRYVLCMEASGSMELANN
ALARATRVFVKKQPEIHLFAARFKELSGDVMEARTEYQLLYSEISPGLLEAVVKHANMEN
RLGDRDAAFSIYEKAIAAEQEKGQSQILPMLLVQYSRFVYLVVGNAEKAREILAGSLEHI
QPSKPLLEAIIHLESIQPSPKHADYLDSLVEKFIMPNPENPNMGSTTDREEISSIFLEFL
DLFGDAQSIKRAENRHAMLFLRQKSMVISKKRNAEDFLTSDKAKIAKTYPEPGQSVMGAY
PNAQIQWPAGYGQKAPAWPQTSQSQGQQWNPGYAPQPAYNAYGGYANYGQPQLPTSAPQS
ASYGAYPPTYPVQAYPQQTYAQTAAAPAPAPAAAATVFPQQPAPTQSYYGSYY
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggaagatagtcaagctgtggtctctcaagcatccagtgctgcagactattcatctaca
gctcatgttcctgctgagtaccctatgaccgattcagctgctccttcaggtggcgaaggc
cttgtttcctctgtacccaccgcagctacagattatgctttgtcagatggtactaatcta
gatgagaggaatatgtacagtcaggaacccaattctgttgaacagaatgccacatatggt
atggcatatgaatctaagcctgatggtggggctgctgtagctagtgaaaatgccattggc
catgaaacagtggcaggtatctctactcatacaactggttatgattccatgaatggaggt
gctggtgaactggccagttatcagcctacaggagttgttgagaatggagatttatcaaat
gatgtgggtggtactgttgttcaacaaccatatgaagatgtggtgtatactgctgaggaa
gaaagattatggaatatggtgagagcaaattgtttagacttcaattcttggacagccctc
atcgatgaaacagagaaggttgcagagaacgacattataaaaattcggaaagtttatgat
gcattcttggccgaatttcctttgtgttatggctactggaaaaaatatgctgatcatgag
ggacgtctggacagtgtcgacaaggttgtggaggtgtatgaacgggctgtcctagcagtg
acatattctgtggaaatttggttgcattactgtacgtttgcaatatcaacatatgaagat
ctggatactattcgaaggctgtttgaacgtggattggcatatgtgggaacagattatggg
tcacatattttgtgggatgagtacatcagatatgaagagtctcatcaagcatggagtcat
ctggccatgatttataccagaatacttgagcatcctatccaacaactggatcgttattat
tattgttttaaggagttggctgctagtcgacctttatctgaaatacggactcctgaagaa
gctgctatggctgctgccacagctgagactggtggtggccagagtcttgagggtgaggtt
cgtcctgatggtgtagagcaatctccaaagcctgtaagtgcaggtttaacagaggcagag
gagttggagaagtatatcgcaattagggaagagatgtataagaaagctaaagagttcgaa
tctaagatcattggttttgaaacagctattagaaggccatacttccatgtcaggcctctt
gatgatccagagcttgaaaactggcacacctatcttgattttattgagagaggagatgac
tttaacaaggttgtgaagttgtatgaaagatgtctaattgcttgtgccaattatccggag
ttctggatccgttatgttttatgcatggaagcgagtggaagcatggagcttgcaaataat
gctcttgctcgggctactcgagtctttgtgaaaaagcaaccagagattcacctttttgct
gccagatttaaggaactaagtggagatgttatggaagctcgtacagagtatcagcttctg
tattctgaaatttcacctggtctgttggaagctgttgttaaacatgcaaacatggaaaat
cgactgggagacagagatgctgcattttctatatatgagaaggctatcgctgctgaacag
gaaaaagggcagtctcaaatattgccaatgttgcttgtgcagtattcgcgatttgtatat
ctggttgttggtaatgcagaaaaggctagggaaattttagctggatctctcgagcatatt
caaccatccaaaccccttctcgaggcaatcatccatctggagtcgatccagccatctccg
aagcatgctgattatttggattcattggtggagaagttcatcatgcccaatcctgaaaat
cccaacatgggtagcaccactgacagagaagagatatctagcatatttttggagtttttg
gatctctttggagatgcacagtcaattaaaagggctgaaaataggcatgctatgcttttt
ctacgtcagaagagcatggtgatatcaaaaaaacgaaatgctgaagatttccttacctca
gacaaggctaaaatagcaaagacttatccagagccaggtcagtcagttatgggagcatac
ccaaatgcacagattcagtggcctgctggttatggacaaaaagctccagcttggccacag
acttcgcagtcacaagggcagcagtggaatcctggatatgcaccacagcctgcgtataat
gcatatggaggttatgctaattatggccagccgcagttgcccacatcagcacctcagagt
gcttcttatggtgcatatcctccgacatatccagtccaggcttatccacaacaaacatat
gcccagactgcagcagcaccagcaccagcaccagcagcggcagccactgtatttcctcag
caaccagctcccacccaatcatattatggcagttactactga
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