Elaeis guineensis (African oil palm): 105054684
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Entry
105054684 CDS
T03921
Name
(RefSeq) rRNA biogenesis protein RRP5 isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egu03009
]
105054684
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
90S particles
Other 90S particles
105054684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
UTP6_C
MOV-10_beta-barrel
Motif
Other DBs
NCBI-GeneID:
105054684
NCBI-ProteinID:
XP_010934559
UniProt:
A0A6I9RYC5
LinkDB
All DBs
Position
2:complement(88423524..88470260)
Genome browser
AA seq
1930 aa
AA seq
DB search
MAALTEKKAPQRKRPINGTKPHKTFKKPRKDKTRPPAPSELPSSLLVQDDDPDFPRGGAS
VLTREEIAEARAEAEEEFERESKKSKDTRKNKGAQKSLAEAVDDFGSLFGDGVTGKLPRF
ANRITLKNISPRMKLWGVIIEVNTKDLVIGLPGGLRGYVRAEEVSDIIIDDGNKDSESNL
LCSIFHVGQLVSCIVVRVDDDKKDGKGNRRIWLSLRLSLLYKGLMLDAVQDGMVLTAQIK
SIEDRGYILYFGVSSFTGFLPKSEQDGGVFSSGQHLQCVVKSIDKARAVAIVNSDADLVS
KSAMKDLKGLSIDLLVPGMMVNARVHSTLENGIMLSFLTYFTGTVDIFHLQNSFSHATWK
DHYNQNKKVNARILFIDPSTRAVGLTLNPYLVQNKAPPSIVRTGEIYDNSRILRVDRGIG
LLLEVPSSPIPSPAFVSISDVSDEKVTKLEKKFKEGDYVRVRVLGMRHLDGLAMGTLRAS
ALEGSVFTHSDVKPGMLVKAKVIAAENFGAIVQFSGGVKALCPLQHMSELDILKPPKKFK
VGSELRFRVLGCKSKRITVTYKKTLVKSRLPVLASYADATEGLIVHGWITKIEKHGCFVR
FYNGVHGFAQRSELGLEPGSEADAAYHVGQAVKCRVISSAPASRRISISFVISPKSGRSS
ENDVAKLGSIVSGVVERLTPAAVIIHVNGNAYLKGTLFDEHLADHQGQAVLLKSLLRPGY
QFDQLLVLDTEGQNLILSAKYSLINYAKEIPSDLSQIHPLSVVNGYICNIIENGCFVRFL
GRLTGFSPKDKVTDQQIDNLLDAFYVGQSVRSHVLTFNGETGRLKLSLKQSLCSSSDVSF
IQGYFLLEDKIAALQMSDANNSDSSWTRSFSIGSLVEGEIQEIKEFGVVVSFRDHGDVVG
FVTHHQSGGVNVEVGSVVKALVLDIAKSDGLVDLSLKSELVTSACVDGAKKKRCRSTSTD
LQLHQTVNGVVEIVKENYLVLSIPEYNYAIGYASITDYNMQKLPRKHFLNGQSVLVTVGV
LPSSCSSGRLLLLLKSAGDVSETSRSKRARKMSSYTVGSLVVGEIIDIKPLELILKFGTG
FRGRIHITEVFDNNHAPENPFSKFKIGQLLDARIVAKLEQSGKSGKGYQWELSVRPSLLT
GESMKIPTAEEFNFSVGSIVRGYVVKVDGEWVWLTVSRSVMSHIFVLDSSCEPGELQEFQ
QRYSVGQAVKGKIISINKEKKLLRLASCPSSSVSGSSVDHEIVKVDIQENKVSNVDCAEH
IIRGDIVGGKVKRILPGVSGLLVQIGPHLFGKAHYTELIDTWVPQPLCGYHEGQFVKCKI
LEITRSLEGTLHVDLSLRSSLQDIQSVDSTVLDNNLNTHIQRFEKIEDLHPNMDVQGYVK
NVTSKGCFIMLSRMIDARILLSNLSDGYIENPEKEFPAGKLVHGRVLSVDPASKRVEVTL
KTEMKTEVAKSDASVFCNLHVGDVISGQIRRIEPYGLFIAIDNTNVVGLCHKSELSDEPI
DNIETRYKAGDRVVAKVLKVDEERHRISLGMKKSYIGNASDAPIISRHGTADGSFDGIST
VDDTLLALQQNDDLPHAERMFGCDNEACAVLEPAETRASVLPLQVVLDDSDGSDLDNVTV
SQEIVNLTDMAAKKSDRRTKKKAKEERELEISASEERNLQKDIPKTADEFEKLVRSSPNS
SFVWIKYMAFMLSLADVEKARSIAERALRTINIREEGEKLNIWVACFNLENEYGSPPEEA
VKKTFQRALQYCDPKKLYLALLGMYERTEQHKLADELLERMTKKFKNSCKVWLHCVQSFL
KQDKDGIQSLVNRALLSLSRNKHIKFISQTAILEFKFGVPDRGRSMFEGILREYPKRTDL
WSIYLDQEIRLGDVEVIRALFERATFLSLPPKKMKFLFKKYLEYEKAHGDEDRIEHVKKR
ALEYVESSLA
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atggcagctctcactgagaagaaggcgccccagaggaagcggcccatcaacggaacgaaa
ccccacaagaccttcaagaagccgagaaaggataagacacgccccccggctccatcggag
ctgccctcttccctcctcgttcaagacgacgatcctgatttccctagaggaggagcgagc
gttcttactcgggaggagatagcagaggctcgagcggaggccgaagaggagtttgagagg
gagtccaagaagagcaaggacacaaggaagaacaaaggggcccagaagtcgttggctgaa
gccgtggatgattttggatcactttttggcgatggcgtgaccgggaagctacctaggttt
gccaaccgcatcacgttgaagaatatttcaccaagaatgaagctttggggagtcatcatt
gaagtaaacacaaaagatcttgtaattggtcttccaggggggctaagaggatatgttcgt
gcagaagaagtgtctgacattattatagatgatggaaacaaggattctgaaagtaatttg
ctttgtagcatattccatgtcgggcagcttgtttcttgcatagtggtacgggtggatgat
gataagaaagatggaaagggcaacagaagaatttggctgtcacttcgccttagtttgctg
tacaagggccttatgttggatgctgttcaagatggcatggttctgactgcacaaataaag
agtattgaagaccgtggttatattctttacttcggagtgtcatcttttactggttttttg
ccaaagagtgaacaagatggtggcgtatttagtagtggacaacatttacaatgtgttgtc
aaaagtatagataaagctcgagctgttgctattgtgaattctgatgccgatttggtgtct
aaaagtgctatgaaagatctaaaaggactctcgattgaccttttggttcctggcatgatg
gttaatgctcgtgtccactctacccttgagaatggaattatgctgtcattcctcacttat
tttactggaacagtagatattttccatctgcaaaactccttctcccatgcaacttggaaa
gatcactacaatcagaataagaaggtgaatgctcggatattatttattgatccatcaact
agagctgttgggctgaccttgaatccttaccttgttcaaaataaggctcctccttctatt
gtcagaactggagaaatttatgataattcacgaattttaagggttgatagagggattggt
cttcttcttgaagtaccttcttctccaattccttcacctgcatttgtcagtatatctgat
gtttctgatgaaaaagttacaaagctagaaaaaaagttcaaggaaggagattatgttcgt
gttcgtgttcttggaatgagacatttagatggactagcaatgggcaccttaagggctagt
gctttggaagggtcggttttcactcattcagatgtcaagcctggaatgttggtcaaagct
aaggttattgctgcggaaaattttggtgctattgtccaattttctggtggtgtgaaagct
ctttgcccccttcaacacatgtcagagttggacattctaaagcctcccaagaagtttaag
gttggatctgagttgcggtttcgtgtgctgggttgcaaatccaagagaataactgtcaca
tacaagaaaactctagttaaatcaaggctgcctgtgcttgcttcatatgctgatgctact
gaaggattaattgtgcatggatggataactaaaattgaaaagcatggttgctttgtgagg
ttttacaatggagttcatggttttgcacaaagatcagagcttggattggaaccaggaagt
gaggcagatgctgcatatcatgttggacaggcggtcaaatgtagggtaattagttcagct
ccagcttcgcgaagaatcagcattagttttgttatatctcccaaaagtggcaggagttct
gagaatgacgttgccaagttgggtagtattgtttctggtgttgttgagcgacttacgcct
gcagcagttattatccatgtgaatggaaatgcttatttgaaagggacattatttgatgag
catttagcagatcaccaggggcaagccgttcttttgaaatctttattgagacctggatat
cagtttgatcagcttttggtgctagatactgaaggccagaacttaattctttcagcaaag
tactctcttattaattatgccaaagagataccttcagatctttcacaaattcatccctta
tctgtagtcaatggatatatctgcaatataattgaaaatggctgctttgttcgttttctg
ggacgtttgactggattctctccaaaagataaagttaccgatcaacaaatcgataattta
ttggatgcattctatgttggacaatcagttcgtagtcacgtcctcacttttaatggtgaa
actggtcggcttaaactatccttgaagcagtctttatgttcctcatcagatgtttcattt
attcaaggatattttcttctggaggataagatagcagcattgcagatgtcagatgccaat
aattctgattcaagttggacgagaagcttcagcattggcagtttggttgagggagagatt
caggaaataaaagaatttggtgttgttgttagcttcagagatcatggtgatgttgttggg
tttgttacacatcatcaatctggtggagttaatgtggaagtgggatctgttgttaaagct
ttggttctggatatagctaagtcagatggccttgttgatttatcccttaaatcggagctg
gtgacaagtgcttgtgtagatggagctaagaagaagcgatgtcgaagtacatctacggac
ttgcagctgcaccaaacagtaaatggtgtggtggagattgtgaaagaaaattatttggtt
ctttcgattccggagtataattacgctataggatatgcatcaataactgactataacatg
caaaagcttcctcgcaagcacttcttgaatggacaaagtgtccttgtgactgttggggta
cttccaagctcatgttcttctggaagactgttgctgcttcttaaatctgcgggtgacgtt
tctgagacttctagatctaaaagggccagaaaaatgtctagctacacagtgggctcgctt
gttgtgggggagattattgacataaagcctcttgaacttattttgaaatttgggaccggg
tttcgtgggagaattcatataaccgaggtattcgacaataatcatgctccagagaatcca
ttcagtaaatttaaaattggacaattgcttgatgcacggatagttgcgaagcttgagcag
tcagggaagagtggaaaagggtatcaatgggagctgtcggttagaccctctctgcttaca
ggagaatcaatgaaaattcccactgccgaggagttcaatttttcagtgggcagcattgtc
cgaggttatgttgttaaggtggatggtgagtgggtctggttaaccgtgtctcgatccgtc
atgtctcatatttttgtccttgatagttcttgtgaacctggtgagcttcaagaatttcag
cagcggtacagtgtgggtcaagctgtcaaaggcaaaatcattagcataaataaagagaaa
aagctgttgaggttagcatcatgcccatcttcttctgtttctgggtcatcggttgatcat
gaaattgtgaaggtagacattcaagaaaataaagtttctaatgtggattgtgctgagcac
attatacgaggtgacattgttggtggtaaagtcaaaagaatccttcctggtgttagtggg
ctgcttgtgcagattgggcctcatctttttggaaaggctcattatactgaacttatagat
acatgggttcctcaacccctatgtggatatcatgaaggacaatttgtcaaatgtaagatc
ctggaaataactcgttcgttggagggaactttacatgttgatctgtctctacgttcttca
ttacaagacatccaatcagttgattccacagtgctcgacaacaatctgaatactcacatc
cagcggtttgaaaagattgaagatcttcatcctaacatggatgtgcagggatatgtcaag
aatgtaacttcaaaaggatgtttcattatgctgtctcgaatgattgatgctagaatcctc
ctatcaaacttgtctgatggatacattgaaaatcctgaaaaagagtttccagctggaaag
cttgtacatggcagggttttatctgtggatcctgcatcgaagagagttgaggtgacattg
aagacggaaatgaagaccgaggtagcaaaatccgatgccagtgttttttgtaatctacat
gtcggtgatgttatttctggccagattagacggattgagccatatggcctgtttatagca
attgataacaccaatgtggttggtttatgtcataaatctgaactttcagatgagcccatc
gataacattgaaactagatataaagcaggtgatagagttgttgcaaaagttttgaaggtt
gatgaggaaagacatcgaatatcccttggcatgaagaaatcttacattggaaatgccagc
gatgctcctatcatctcacgtcatggtacagctgatggcagttttgatggtatttctact
gtggatgatacattgcttgctttgcagcagaatgatgacctaccccatgctgaaaggatg
tttgggtgtgataatgaggcctgtgcagttctcgaaccagcagaaacaagggcttctgtt
cttcctcttcaggttgttcttgatgactcagatggttctgatttggataatgtaactgta
agccaggaaattgtcaatttgaccgatatggctgcaaaaaagagtgatagacgcacgaag
aaaaaagccaaggaggaaagggagctagaaatcagtgcttctgaggagaggaatctacag
aaggatataccaaagacagcagatgaatttgagaaattggtcagaagttctcctaacagt
agttttgtctggataaagtacatggctttcatgttatctcttgcagatgttgaaaaagca
cgctccattgcagaaagggctctgagaacaataaacatcagagaggaaggggaaaagctt
aatatttgggtcgcatgttttaatctagagaatgaatatggaagtccaccagaggaggct
gttaagaaaaccttccagagagcattgcagtattgcgatcccaaaaaattgtatctagct
cttctgggaatgtatgaaaggaccgaacaacacaaactagcagatgagcttctggagaga
atgaccaaaaagttcaaaaactcatgcaaggtttggctacactgtgttcaaagcttcctg
aagcaagacaaggatggaattcaatctcttgtaaaccgtgctcttctgagtctgtcacgc
aacaagcatattaaattcatttcacagactgctatcctagaattcaagtttggtgtgcct
gatagaggacgatctatgtttgaaggtatattgcgagagtatcccaagagaacagatctt
tggagcatatacctcgatcaagaaattcgcctgggtgacgtggaagtgatacgtgcatta
tttgagagagcaacatttctgagtcttccaccaaaaaaaatgaagttcttgtttaagaag
tatctggagtatgagaaggctcatggtgatgaagacaggatagagcacgttaaaaagaga
gctttggagtatgtggagagctcgcttgcttga
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