Elaeis guineensis (African oil palm): 105054786
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Entry
105054786 CDS
T03921
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X2
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105054786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105054786
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
105054786
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
105054786
NCBI-ProteinID:
XP_010934679
UniProt:
A0A6I9S7F9
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Position
12:complement(22755353..22776316)
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AA seq
690 aa
AA seq
DB search
MARNKEAVVLLLDVGPSMHSVLPEVERVCSMLVQKKLIFGKSDEVGFVLFGTDDTYNELQ
KEVGGYEHIVVLRNIGVVDGNAVGFLQNLPRGNFPGDFIDAIVVGIDLLIKKFGPTNKGK
QRICLITDAKYPIKEPYEGTKEDQVNTISQMMQTHGIRLDCIVIREKLPGADLRVMEEND
SLLDQFSRKAIAKIVHVDSPTSLLGALKTRNISPVTVFRGDLELSSTMKIKVWVYKKTSE
EKFPTLKKYSGKAHSSDKFATYEVKVDYEYKSMEDPDKVVPPEQRIRGYRYGPQVVPISS
AEWEAVKFKPEKGVKLLGFTDASNILRHYYMKDVYIFIPEPGNQKAIVAVSAIARAMKDM
NKSAILRCVWRQGQGNVVIGVLRPNISSVDNIPDSFYFNVLPFVEDVREFQFPSFRSFPS
SWQPNEQQQEAADNLVKMLDLTPSEGEEVLQPDYTPNPVLERFYHFLDLKSKQPDADVPP
LDRNLRGITEPDPAVFSCHKSVIDNFHKNFELKEKPKKKKSSKRAWRGKPSASSEEEGVD
GEASGFQSSNLMKDSSNINVEKIGNLNPVQDFEAMMARRDSSKWVSKAIKEMQNHVSDLL
ENSYEGDAYSKAIECLLALRKGCILEQEPKEFNRFLLGLYEKWKDTDLANFFELLSSKNI
TLISQKEAPDSNVTEEDAKNFPVKAELKSQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtaacaaggaagcggtggttttgctactggatgttggtccgtcgatgcatagc
gttctccctgaggttgaaagggtctgctcgatgctcgtacagaagaagctaatttttggt
aagagcgacgaagtggggtttgtcttatttggaaccgacgatacatacaatgagcttcaa
aaggaagtgggtggatatgaacatatagtggtcttacgtaatattggagttgtcgatgga
aatgcagtgggttttctacaaaatcttccgagaggaaatttccctggtgactttattgat
gccattgttgttggaatagacttgctgataaagaaatttgggcctacaaacaagggaaaa
cagcgcatttgtctcatcactgatgcaaagtatccaattaaagagccgtatgaggggaca
aaagaagatcaagtcaataccatctctcaaatgatgcaaactcatggaataagactcgat
tgtatcgttatcagagaaaaactaccaggagctgatctgagggtaatggaggaaaatgat
agtctattggatcagttctcaaggaaggcaatagcaaaaatagtacatgttgatagccca
acatcattgttgggtgctcttaaaactcgaaatatctccccagtgacagtgttcagggga
gatttggaactaagctcaacaatgaagatcaaggtatgggtttataaaaaaacatctgag
gagaaatttcctacattaaagaagtattctggcaaagcacattcatctgataaatttgct
acttatgaagttaaagttgattatgagtacaaaagcatggaagatcctgataaagttgtt
ccaccagaacaaagaatcagaggttatcgttatgggccacaagtagttcctatatcatca
gctgaatgggaggcagtaaagttcaaacctgagaagggtgtaaagctgttaggatttaca
gatgcttccaacatattgcggcactactacatgaaggatgtatatatctttattcctgaa
ccgggcaaccaaaaagcaattgttgcagtttctgctatagctagagccatgaaggatatg
aacaagtctgctattttgcggtgtgtttggaggcaaggtcagggaaatgttgtgattggg
gtgttaaggcccaacatatcttctgtggacaatattccagattccttctactttaatgtg
cttccttttgttgaggatgttcgagaatttcaatttccatccttcagaagtttcccatca
tcatggcagccaaatgaacaacagcaagaagcagcagataaccttgtcaagatgttagac
cttacaccatctgaaggagaagaagtgctgcaacctgactacacaccaaatcccgtcctg
gagcggttttatcactttctggacttgaagtcgaagcagccagatgccgatgtgcctcca
cttgatagaaaccttagggggataactgaacctgatcctgctgttttttcttgccacaag
tctgtaattgataacttccacaaaaattttgagctgaaggagaaaccaaagaaaaagaag
tcttctaaacgtgcctggaggggaaaaccatcagcttctagtgaggaggaaggtgtcgat
ggtgaggcatctggctttcagagttctaatttaatgaaagattcgtctaacataaatgtt
gaaaaaattggaaatctgaatcctgtccaagattttgaagccatgatggcacgtagagac
agttcaaagtgggtcagcaaagcaataaaagagatgcaaaatcatgtttctgatttgtta
gaaaattcttatgaaggggatgcttacagcaaggcaattgaatgcttgctggctctacgg
aaaggttgtattcttgagcaggaaccaaaggaattcaatcggtttctgcttggtctttat
gagaaatggaaagacactgatcttgcaaatttttttgagctgctttcatctaaaaatatc
acattgatcagccaaaaagaagcacctgacagtaatgtgacagaagaggacgccaaaaat
ttcccagtcaaagccgagctaaaatcccagtag
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