Elaeis guineensis (African oil palm): 105055377
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Entry
105055377 CDS
T03921
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
egu03015
mRNA surveillance pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105055377
09122 Translation
03013 Nucleocytoplasmic transport
105055377
03015 mRNA surveillance pathway
105055377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105055377
03041 Spliceosome [BR:
egu03041
]
105055377
03009 Ribosome biogenesis [BR:
egu03009
]
105055377
03012 Translation factors [BR:
egu03012
]
105055377
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105055377
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105055377
mRNA cycle factors
Stress granule specific factors
105055377
Spliceosome [BR:
egu03041
]
Complex C
Other components
EJC/TREX
105055377
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
90S particles
Helicases
105055377
Translation factors [BR:
egu03012
]
Eukaryotic type
Initiation factors
eIF-4
105055377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
105055377
NCBI-ProteinID:
XP_010935461
UniProt:
A0A6I9S0A7
LinkDB
All DBs
Position
12:complement(8999870..9012627)
Genome browser
AA seq
409 aa
AA seq
DB search
MAAAATAVPRGRQPQGRGVDDENLVFETSPGVEAITSFDQMGIRDDLLRGIYAYGFEKPS
AIQQRAVIPIIQGRDVIAQAQSGTGKTSMIALSVCQMVDTTSREVQALILSPTRELAAQT
EKVILAIGDYINVQAHACIGGKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIK
LLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEITSKFMTDPIRILVK
RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNF
TVSSMHGDMPQKERDAIMAEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYI
HRIGRSGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgcaacggcggtccctcggggccggcagccgcagggccggggtgtcgac
gacgagaacctggttttcgagacgagccctggggtggaggccatcacgagcttcgaccag
atggggatccgcgacgacctcctccgggggatctacgcctacggcttcgagaaaccctcc
gccattcagcagcgggctgtgattcctattatccagggccgcgacgtcatcgcccaggca
cagtctggtacgggaaagacctccatgatcgccctctccgtctgccagatggtcgacacc
acctcgagagaagttcaggcattgatcctgtcaccaacaagagaacttgctgcccagact
gagaaagttatattggctattggtgattacataaatgtacaagcccatgcatgcattggt
gggaagagtataggtgaggatatcagaaaactagagtatggagttcatgtggtttcaggg
acaccaggcagagtctgtgatatgatcaagcgaaggaccttacgcactagggctatcaag
ctcttagtgcttgatgaatctgatgagatgttgagcagaggtttcaaggaccagatatat
gatgtataccggtatcttcctccagaacttcaggttgttctgatttctgcaacacttcct
catgaaatattggagataaccagcaagtttatgactgatcccattagaatacttgtcaag
cgtgatgagttgacgctggagggtatcaaacaattctttgttgctgttgagagagaggaa
tggaagttcgatacgttatgtgatttatatgacaccctcacaattacccaagctgttatt
ttctgcaacacaaaaagaaaggttgattggttgactgaaaaaatgcgcagcaataacttt
acagtatcttctatgcatggggacatgcctcagaaggagcgagatgcgatcatggccgag
ttcaggtcaggtgcaacccgtgtgttgattacaacagatgtatgggctcgtgggcttgat
gttcagcaggtttctctagtgataaattatgaccttccaaacaatcgagaactttacata
catcggattggtcgctctgggcgttttgggcgtaagggtgtggcgataaactttgtccgc
aaggatgacatcaggatattaagagatatcgaacagtattatagtactcagattgatgaa
atgccaatgaatgttgctgatcttatttga
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integrated database retrieval system
