Elaeis guineensis (African oil palm): 105055480
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Entry
105055480 CDS
T03921
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
egu04812
]
105055480
Cytoskeleton proteins [BR:
egu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
105055480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
eIF2A
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
VPS8_N
Motif
Other DBs
NCBI-GeneID:
105055480
NCBI-ProteinID:
XP_010935617
UniProt:
A0A6I9S089
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Position
12:7561942..7580161
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AA seq
781 aa
AA seq
DB search
MAATKRAYKLQEFVAHSSNVNCLKIGRRTSRVLVTGGEDHKVNLWAIGKPNAILSLSGHT
SAIESVSFDSSEVLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCISVDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWIVSGGEDNIVKLWDLTAGKLLH
DFKCHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETTGVRSMTFNPDG
RTLLCGLHESLKVFSWEPVRCHDAVDVGWSRLSDLNTHEGKLLGCSYNQSCVGVWVVDLS
RIEPYAVATAARSNGHSEPKSTSSGNMSLQADNNLKANMGRLSVSQNSEPAVKETKPASA
TGSVPGTPQRIGMSNGPKITAANSAAATGAPTLKRSSSKTHGTTNIQTFNKNDVIPVIVP
RTSSRVELGSDSRKETGAGRMLPYSVQSKFSDFRKLSNIRDDSDKSDTTIQSGFVGDKNS
ELNEVLDQNFQSAGNGVDPPVSAGEHNPDDVKRTGTGKLGASLLTEPSTNHNHENGNFRA
HKPRDTCSVEVPKGGKTRSLVASWEKREQSPGYEGPTPSSSSETMTATNVSYSLRGRPPS
FGKETVSASDEDTIADLMEQHEQFLNSAQTQLTKLQVVHRLWERNDFRGVIQAMEKMSDH
AVSADVVSIWTEKSDNITLDIFTCLLPVLTSLLESKMDRHLGISLEILLKLVRTFGPVIH
STLSAAPSVGVDLQAEQRRERCNLCFIELEKAKHSLFTLTRRGGSTAKAAQELNLALQEV
L
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccaagcgcgcctacaagctgcaggagtttgtggcacattcttccaatgtc
aattgcctcaagattgggaggagaacctcgagagttcttgtcacgggaggagaggaccac
aaggtcaatctttgggctattgggaagcccaacgctatactgagtctatctggccataca
agcgcaattgagtcagtaagttttgattcatcggaagtattggtggctgcaggagcagct
agtggcacaataaagttgtgggatttggaggaggcaaaagttgttcgcacccttacgggt
cacaggtcaaattgtatatcagttgactttcatccatttggggagttctttgcgtctgga
tcattggatacaaatctaaagatttgggacataagaaggaagggatgcattcacacgtac
aaaggccacactcggggggttaatgctatcagatttactcccgatggtcggtggattgtt
tctggtggggaagataatatcgtgaagctgtgggatctgactgctgggaagcttttgcat
gatttcaagtgccacgagggtcaaattcagtgcatagattttcatcctcatgagtttctc
cttgcaacaggttcagctgataaaactgtaaaattctgggaccttgaaacatttgaattg
attggatctgctgggcctgagacaactggtgtacgctcgatgacattcaatcctgatggg
agaactcttctttgtggattgcatgaaagtctaaaggttttctcctgggaaccagtaaga
tgtcatgatgctgtggatgttggttggtctagactgtcagacctgaacactcatgaggga
aaacttcttggatgttcttataatcaaagttgtgttggagtttgggttgtggacctctcg
cgcattgagccatatgcagttgctactgctgcaaggtcaaatggtcattcagaaccaaaa
tctacttcaagtggtaatatgtctttgcaagctgacaacaatttaaaggcaaatatgggg
aggctatcagtgtcacaaaactcagagccagcagtcaaggagacaaaacctgcttcagct
accggtagtgtccccggcacccctcaaaggattggaatgagcaatggtccaaaaataact
gcagcaaattcagccgcggcaactggtgctccaactcttaagagaagttcatcaaagact
catggtacaaccaatattcagaccttcaataagaatgatgtgatacctgttatcgtcccc
agaactagctcgagagtggagctgggctctgattctagaaaagaaactggtgctggaaga
atgctaccatacagtgtccagtcaaaattttctgattttcggaagttatcaaatatcaga
gatgattcggataaatcagatactaccattcagtctggatttgtgggtgataaaaactct
gaattgaatgaagttttggaccaaaattttcaatctgccggcaatggtgtagatcctcca
gtgagtgctggagaacataaccctgatgatgttaaacgcactgggacggggaaactggga
gcaagtctattgactgagccaagtacaaatcacaaccatgaaaatggtaactttagggcc
cataaaccgagggacacatgctctgtggaagttccaaaaggaggtaaaacaagatcactt
gttgcaagttgggaaaagagggaacaatctcctggctatgagggtccaacacccagcagt
tcttccgagaccatgactgctacaaatgtctcatattctttgagggggcgccctccatca
tttggaaaagaaacagtctctgctagtgatgaagataccattgctgatctgatggaacaa
cacgaacaattcctaaactctgcacaaactcagttgacaaaactacaggttgttcaccga
ctttgggaaagaaatgatttcaggggtgtcatccaggcaatggaaaagatgtctgatcat
gctgtctctgctgatgtagtaagcatttggacagaaaaaagtgataacataactctggat
atattcacttgtctcctaccagtccttaccagccttctagagagtaaaatggataggcat
ttaggcatttccttggagatcctgctgaagcttgtgagaaccttcggccctgtaatccat
tcaactttatcagctgctccatctgttggcgtggaccttcaagcagagcagaggcgggag
cggtgcaacttatgcttcattgagctggaaaaggccaagcacagtctttttactctcaca
agaagaggagggtctactgcaaaggctgcacaggagctgaaccttgctcttcaggaagtg
ttgtga
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