Elaeis guineensis (African oil palm): 105055948
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Entry
105055948 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105055948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105055948
03036 Chromosome and associated proteins [BR:
egu03036
]
105055948
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105055948
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105055948
PBAF complex
105055948
GBAF(ncBAF) complex
105055948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
105055948
NCBI-ProteinID:
XP_010936291
UniProt:
A0A6I9S1M6
LinkDB
All DBs
Position
13:74686743..74698197
Genome browser
AA seq
989 aa
AA seq
DB search
MEGKGRDVPPAQTNAAAAPPPVVAETLVEGPRRRAGAAKRKAGSTASSSSSAPSKRHAKE
RNPIHHLPPVHNGPCTRARQTPNKVAAGVQRTTEALPVDSGGKGGSAAGDPAEVEEEELV
EEPLVDADFELVRSRGANVHAVPAPAGWFSWKRIHPVEKQMLASFFNGKSENRTPDIYME
IRNYIMKKFHADPQTQVELKDLSDLSVGDMDARQEVMEFLDHWGLINFHPFPPTKPDVAN
SDADSGAKTPSLVDKLYQFETVNSFARYVPKKTELSVPAATPWLLRESSLADDLVRPVGP
SVEYHCNSCSGDCSRKRYHCQKQADFDLCTDCYNDGKFGSGMAPTDFILMDSAEVAGASG
GSWTDQETLLLLEALELFGENWNEIAEHVATKTKXQCILHFLQMPIEDSFLEGEDDSKNN
IQENRDPASADKELGPVNVPEPMQVENAEAKVEPAAVNVPGTADAENTDAKKESTAAHVS
RTTEAENAVIKEESAAIDDLQTKEVENAGDADQAITSATDATEEKSTVDVEISHETDVSI
AIDALKTAFHAVGYFPEGEGLGSFAEAGNPVMALAAFLVGLVERDVATTSCRSSLKAMSE
ESPGIQLATRHCFILEDPPNDVKDPPNDGKDPPACVSAVADMGHEESHKDVSXTPNLEGT
DKSNDCTDKNQENAVSLENEKNLSTASQDCTQKQPDANESCDAEFPSEKAPNTIKDSVDQ
ASPGEQIMSSAPKDASDSALPVVSSPSNTKEPGDLASPGEKAQXAEKKKDDVKSSEDKPS
IMKETGDLASPDKVEQHSDTLKASDTKAISAGLEEQGPQQTTGNGSAVEIGEKTDESNKK
ESPSNDEKNCDSTATNDDHNIDRLKRAAVTALSAAAVKARLLAKLEEDHIRQLVSLVIEK
QLQKLEAKLTLFTDIESVIMRVREQTDRARQRLLHERSQIIAARLGRPTSSFRANPPNLP
TSRIAMGYGTTGPRPLNMAAQKPPPMRRP
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaaaggccgcgacgtaccgccggctcagacgaatgccgcggcggcgccgccg
ccggtggtggccgaaaccctagtcgaagggcctcgtaggagagccggcgctgccaagagg
aaagcgggctccaccgcttcatcctcctcctccgctccttcgaagcgccacgccaaggag
aggaaccctatccatcacctcccccccgtccacaacggcccctgcacccgagcccgccag
acccccaacaaggtcgccgccggcgttcagaggaccacggaggcattgccagtggattcc
gggggaaagggtggatccgccgcgggagatccagccgaggtggaggaggaggagctggtc
gaggagccacttgtggatgcggacttcgaattggttcgatcccgtggagccaatgtccat
gccgtccctgcgcctgctggatggttttcatggaagaggatccatccagttgagaagcag
atgctggcttcatttttcaatgggaagtctgagaatcggacacctgacatatacatggag
ataaggaattacattatgaagaagtttcatgctgacccacagacacaagtggaacttaag
gatttgtctgacttatctgttggagatatggatgcgaggcaagaagttatggagttcttg
gatcactggggtttgattaattttcatcctttcccaccaaccaaacctgatgtggccaac
tctgatgctgatagtggagctaaaacaccatccttggttgataaactgtatcaatttgag
acagttaactcattcgcccgctatgttcccaagaagacagaactgtctgtacccgctgca
acaccttggttgcttcgtgaatcttccctagctgatgatttggttaggcctgttggacct
tcagttgagtaccattgcaactcttgttcaggtgattgctcccgcaagcgctaccattgc
cagaaacaggcagatttcgatttatgcactgattgctacaatgatgggaaatttggttca
ggcatggcaccaactgatttcattcttatggattctgcggaggttgctggtgctagtggt
gggagttggacagatcaggaaaccctgcttcttctagaagccttagaactttttggggaa
aactggaatgagattgctgaacatgttgccacgaaaaccaagnctcaatgcatcttgcac
tttcttcaaatgcctatcgaggattcttttttggaaggtgaagatgattctaaaaacaat
atccaggaaaatagggaccctgcttcagcagataaagaattgggtcctgtaaatgttccc
gaaccaatgcaagttgaaaatgctgaagcaaaagtagaaccagctgcggtaaatgttcct
ggcacagcggatgctgaaaatacagatgcaaaaaaagaatcaactgctgctcatgtttcc
agaacaacagaagctgagaatgcagtaattaaagaggaatcggctgccatagatgatctt
caaacaaaggaagttgaaaatgcaggtgatgccgatcaagctataacttctgcaactgat
gctacggaggaaaaaagtactgttgatgttgagatttctcatgaaactgatgtcagcatt
gctattgatgcattgaagacagcatttcatgctgttggttactttcctgaaggagaaggg
ttaggttcatttgcggaagcaggaaacccagtcatggccttggccgcattcttagtaggt
ctggtggaacgtgatgttgctacaacctcatgccgcagttccttgaaagccatgtcagag
gagtctcctggcatccagcttgccacaaggcattgttttattcttgaagatccaccaaat
gatgtaaaggatccgccaaatgatggaaaggatccaccagcgtgtgtaagtgctgttgct
gacatgggtcatgaggagtctcataaagacgtgagcncaacaccaaatttggaaggcacc
gataaatcgaacgactgcactgacaagaatcaggagaatgctgtttctctagagaatgaa
aagaacttgtccactgcatcacaagattgcacacagaaacaacctgatgcaaatgaatca
tgcgatgcagagttcccatcagagaaagcacctaacaccattaaggattctgttgatcag
gcttcaccaggggagcagattatgtcaagtgctccaaaggatgcgagtgattctgctttg
cctgtagtctcttcaccaagtaatacaaaagaaccaggagatttagcttcaccaggagaa
aaggcacaanttgcagagaagaaaaaagatgatgtaaaatcttcagaggacaaacctagt
attatgaaggagacaggtgacctagcttcgccagacaaggtcgaacaacattcagataca
ttgaaggcttcagatacaaaggctatttcagctggtctggaagaacaggggccgcagcaa
acaactggaaacggttcagcagttgaaattggggagaaaacagatgagagtaataaaaag
gaatctccgagcaatgatgagaagaattgtgactcaactgcaacaaatgatgatcataac
atagacaggttaaaacgtgctgctgttacagcactctcagctgcagctgtgaaagctagg
cttcttgccaagctggaggaagaccatattcggcagctcgtctcgctggttattgagaag
cagttgcaaaagttggaggctaaattgacactattcacggacattgaaagcgtcatcatg
agggtgagggaacaaactgacagagcaagacagagacttctccatgagcgttctcaaata
attgcagctcgactgggccggccgacatcctcgtttagagcaaatccacctaacctacct
acaagcagaattgcaatgggctatggtactactggtccaaggccacttaacatggctgct
caaaaacctccacctatgagaaggccgtga
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integrated database retrieval system
