Elaeis guineensis (African oil palm): 105055970
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Entry
105055970 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105055970
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105055970
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
105055970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
T2SSE
AAA_19
DEXQc_Suv3
IstB_IS21
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
105055970
NCBI-ProteinID:
XP_073104279
LinkDB
All DBs
Position
13:complement(71446415..71514681)
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AA seq
2093 aa
AA seq
DB search
MLVSLPRLTKSLRDHYDVDHAYLQRKTILQNLQSRRSRDDSELARKLVPGWDEASSDVRQ
AYKQFLGAIVELINDEVASEEFQEVAKAVYDLFRGPDVDYDVTKRIAEKRGELHRLVGYY
VPDSSIQKVAVSAQRLFTLQCSSHEAALIQESVIDGAADNNSEFGASILFQSPSRFVMDV
PLEDGISLANDCGTTAPFLVEQYDNIVSGHHHSSPEPGTVSLRWLKDACDLIVKRGGSQL
SGDELAMALCRVLLSNKAGDEIAGDLLDLVGDGAFETVQDLLLHRKELVEVIQHGLLILK
SEKLSSSSQLKMPSYGTQVTIQTESERQIDKLRRKEEKRHKRGAEYGSMHDFPAESFLSL
LLASEKKQPFDDLIGTGRGTNSFSVSALPQGTMRIHHKGYEEVRIPPTPTVAMKPDEKLI
EITELDDFAQVAFQGYKSLNRIQSRIFQATYHTNENILVCAPTGAGKTNIAMVAILHEIK
QHFRDGILHKDEFKIVYVAPMKALAAEVTSTFGRRLSPLNLAVKELTGDMQLSKNELEET
QMIVTTPEKWDVITRKSSDMSMSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQ
SMIRIVGLSATLPNYLEVAQFLRVNPESGLFFFDSSYRPVPLAQQYIGISEKDYTKKMEL
FNSICYEKVVDTLKQGHQAMVFVHSRKDTGKTARTLVDIAQKAGELELFMNDKHPQFSLI
KREVSKSRNREVIELFEFGFGIHHAGMLRADRGLIERLFSDGLLKVLVCTATLAWGVNLP
AHTVIIKVRTQLYDPKAGGXAGLGMLDVMQIFGRAGRPQFDKSGEGIIMTTHDKLAYYLR
LLTSQLPIESQFVNSLKDNLNXEVALGTNKFKEACAWXGYTYLFIRMKTNPLVYGVTWDE
VIGDPSLTTKQRSLIVDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYLQYSSVETYN
LMLRRHMNDSEVINMVAHSSEFXNIAVREEEQDELEKLSKFACPLEVKGGPTDKHGKISI
LIQVHISRGSIESFSIISDAAYICASLGRIMRALFEXCLRRGWCEMSCFMLEYCKAVDRQ
IWPHQHPLRQFDRTFHRRFILRKLEERGADLDRLFEMEEKDIGALIRLCSGGKVFLLFVK
QYLGYFPNIICLLVXVPITRTVLKVDLLITPDFXWKERFHGAAQRWLILVEGDSENDHIY
HSDFFTLTKRMARGESQKISFTVPIFEPHPPQYFIQAVSDSWLHAESLYTVSFHNLTLPE
TQISHTELLELKPLPVSALGNEAYENLYKFSHFNPIQTQAFHVLYHSNDNVLLGXPTGSG
KTISAELAMLHQFNTEPDMKVVYIAPLKAIVRERMNDWRKRLVSQLGKKMVEMTGDFTPD
LMALLSADIIISTPEKWDGISRSWHSRSYVMKVGLMILDEIHLLGADRGTILEVIVSRMR
YISSQTERSIRFVGLSTALANARDLADWLGIGENGLFNFKPSVRPVPLEVHIQGYPGKFY
CPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQLAASDENPRQFLNMSEA
TLGMVLSQVTDNNLRHTLQFGIGLHHAGLNDRDRSLVEELFSNNKIQILVSTSTLAWGVN
LPAYLVIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYK
KFLYEPFPVESNLREHLHDHINAEIVSGTICHKEDAVHYLTWTYLFRRLVVNPAYYGLED
TEASALNSYLSRLVQSTFEDLEDSGCIKMNENSVEPLMLGSVASQYYLSYMTVSMFGSNI
GPNTSLEVFLHILSAAAEFDELPVRHNEENINRTLSEKVPYLVDQHHLDDPHVKANLLFQ
AHFSGIELPISDYITDLKSVLDQSIRIIQAMIDISANSGWLSSTMTCMHLLQMVMQGLWF
ERDSSLWMLPCMNNDLLIHIKKAGISTLQDLLGLPSANLQRLLRQFPSSELYQDLQHFPR
VQVKLKLQVEDGKKPPSLNIRLEKTNSKRLTSRAFAPRFPKIKDEAWWLVLGNVTTSELY
ALKRVSFSDRLFTRMELPPTVINPQETKLILVSDCYLGLEQEHSIGESENQFS
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atgctggtctcgttgcctcgcctgacaaagtctctcagagatcactacgacgtcgatcat
gcttacctccagcgcaagacgatcctccagaatctccaatcaagaagatcgcgtgatgat
tcggaacttgcgcggaagttggttcctggatgggatgaagcttcaagtgatgtgcgccaa
gcatataaacaatttcttggtgctatagtggagttgataaatgatgaggtggcctcagaa
gaatttcaggaagtggcaaaagctgtttatgatctgtttagggggccagatgtggactat
gatgttactaagaggattgctgagaaaaggggagagttgcataggcttgttggttactat
gttccagattcgagtatccagaaagtagctgtgtcagctcagagactttttactttgcag
tgtagtagccatgaggctgcactaatccaggaaagtgtgattgatggagctgcagataat
aacagtgaatttggtgctagtattctttttcaatctccttctcgctttgtgatggatgtg
ccattggaagatggtatatccttggccaatgattgtggtactactgcaccattccttgtg
gagcagtatgataacatagtatctggccatcatcattcaagtcctgagccgggaacagtg
agtttgagatggctgaaagatgcatgtgatcttatagtaaagaggggtggctctcagctt
tctggagatgagcttgcaatggcactttgtcgggtgctcctgtcaaacaaagcaggcgat
gagatagctggtgatttgttggatcttgttggtgatggtgcatttgaaaccgtacaagat
ttattgttgcatcggaaggagctagtggaggtgattcaacatgggttgctcatacttaaa
tctgagaaattgtcttcaagcagtcaactgaagatgccgagctatggcacacaggttacc
atacaaacagaatctgaacggcaaatcgataaacttaggcgcaaagaggaaaagcgtcat
aaacgcggggcagaatatgggagcatgcatgattttcctgctgaaagttttttgtctctt
cttttagcgagtgagaaaaaacaaccttttgatgatctgattgggacaggtcggggaaca
aattctttctcagtcagtgctcttcctcagggaacaatgaggatacatcataaaggctat
gaagaagtcagaattccacccactccaactgttgcaatgaagcctgatgaaaagctgatt
gagatcacagaactcgatgactttgctcaagttgctttccagggttataaatcgctcaac
cgcattcagagccgtatttttcaagcaacatatcatacaaacgaaaatatactagtttgt
gcgccgactggagctggcaagacaaatattgctatggttgctattcttcatgagatcaag
cagcatttcagggatggaattttgcataaagatgagtttaaaattgtatatgttgctcca
atgaaggctttggcagctgaggtgacatccacattcggtcgtcgcttatctcccttgaat
ctggcggtaaaagaacttactggtgacatgcaactctctaagaatgagctcgaggaaacc
cagatgatagttacaacacctgaaaaatgggatgtcattactcgcaaaagcagcgacatg
tcaatgtcaatgctggtgaaacttctaattattgatgaagtacacttgttgaatgatgat
agaggccctgtgatagaagcgctagttgctcgaaccctccgacaggttgaatcaacacaa
tctatgatacgcattgtaggtctgtctgctaccctacccaattatttagaggttgcacaa
tttttgcgcgttaatcctgaaagtggattattcttttttgattcaagttatcgtccagtt
cccctagctcaacagtacattgggattagtgagaaggattatacaaagaaaatggaactg
tttaactcaatatgctacgagaaggtagtagatacattaaagcaaggacatcaagcaatg
gtttttgttcattctcgcaaggacacagggaaaactgcaagaacactggttgacattgcc
cagaaagcaggtgaactagaattatttatgaatgataaacatcctcaattttctttgatt
aagagagaagttagtaagtccagaaaccgggaagttattgagttatttgaatttgggttt
ggcattcatcatgctgggatgctgcgagctgatagaggcttgattgagcgccttttctct
gatggtctgctgaaagttcttgtttgtactgcaactttggcctggggagtaaacttacct
gctcatacagtcatcatcaaggtgaggacgcaactatatgatcccaaggctggtggtnng
gcgggacttggtatgcttgatgttatgcagatctttggccgtgctggaagaccccagttt
gacaaaagtggcgaaggcattattatgacaactcatgacaaattggcttattatttgaga
ctgttgacaagtcaactccctatagaaagccagttcgtaaactcattgaaagataatttg
aatngcgaggtggccttgggcacaaacaaattcaaggaagcatgtgcatggnctggatat
acatatttatttataaggatgaagacaaatcctttggtgtacggagtaacatgggatgag
gttattggagatccttccttgaccaccaaacaacgatctcttatagttgatgctgcacga
gcccttgacaaggcaaaaatgatgcgatttgatgaaaaaagtggcaatttttactgcaca
gagcttggtcgcatagcaagccatttctaccttcaatattctagtgttgaaacttataat
ttgatgcttaggcgccacatgaatgatagcgaagtaattaacatggtggcccattcttct
gagtttngaaatattgctgttagagaggaggaacaggatgagctagaaaaactgtctaaa
tttgcatgcccattagaagtaaagggtggacccactgataagcatgggaagatttcaatc
cttattcaggtgcacatatcacgtggttcaatagaaagcttctctataatttctgatgca
gcatatatttgtgcaagcttgggtcgtattatgcgtgctttgtttgaantttgcttgcgt
agagggtggtgcgaaatgtcatgtttcatgttggaatattgcaaagctgtggatcgccaa
atttggcctcatcagcatccacttaggcagtttgacaggacctttcacaggaggtttata
ctaagaaaacttgaagaaagaggagctgatttggatcgtctcttcgagatggaggagaaa
gatattggtgctctgattcgtttatgctccggggggaaggtatttttactatttgtcaag
caatatttagggtatttcccgaacatcatttgtctgctagtgtaagtccctattaccaga
actgttcttaaggtagatcttcttataacacccgactttngttggaaggagcgcttccat
ggtgctgctcaacgctggttgattctcgttgagggtgattctgaaaatgaccacatttac
cattcagatttcttcacattgaccaagaggatggcaaggggagaatctcagaagatttct
tttactgtaccaatatttgaaccacatccaccacagtactttattcaagctgtttctgat
tcttggttacatgcagagtcactttacaccgtgtctttccataacctcacattgccagag
acacaaatatcacacacggaacttcttgaattgaagcctcttcctgtgagtgctcttggc
aatgaggcttatgagaacctatacaaattttcacacttcaatccaatccaaacacaggct
tttcatgtcctgtatcactcaaatgacaatgttctcttgggangcccgactggaagtgga
aaaactatatcagctgagctagcgatgttacatcaattcaacacggaacctgatatgaag
gtagtttacattgcccctcttaaagctattgttcgggagagaatgaatgactggagaaag
cggcttgtttctcaacttggaaagaagatggttgagatgactggggattttactccggat
cttatggcattattgtcagctgatatcataatttctactcctgaaaaatgggatggtatt
agtcgcagttggcatagtcgaagctatgtgatgaaggttggacttatgatactggatgag
attcatttgttaggagctgatcgtggaaccattcttgaggttattgtctctaggatgaga
tacatatcatcacagacagagcgctcaatacgttttgtaggtctatcgacagcattggcg
aatgcccgtgatttggctgactggttgggtattggagaaaatggtctattcaattttaag
cctagtgtgaggcctgtacctcttgaagttcacattcagggatatccggggaagttttac
tgtccaagaatgaatagtatgaacaaacctgcatatgctgccatatgtacccattcaccc
acgaagccagttcttatttttgtttcatctcgccgtcagacaagacttactgcactagat
cttattcagcttgctgcatcagatgaaaatcccagacagttccttaatatgtcagaggca
acacttggaatggttctttcacaagtcactgacaacaacttgaggcatactctgcaattt
ggaattggtctgcatcatgcaggattgaatgatagagacagatccttggttgaggaactt
ttttccaataacaagatccagatattggtgtctaccagcacgctggcttggggtgtaaat
ctcccagcttatctagttatcattaaaggtactgaatattatgatggaaaagcaaagaga
tatgttgattttcctattacagatattttgcaaatgatgggtcgtgcaggtcgacctcaa
tatgatcagcatgggaaggctgttattcttgttcatgaacccaaaaagagcttctacaag
aagttcctttatgaaccattccctgttgaaagtaatctgagggaacatttgcatgatcac
atcaatgcagaaattgtttctggtacaatctgtcacaaggaggatgcagtgcattatctt
acttggacgtatctgtttcgtcgattggttgtaaatccagcttattatggattagaggat
actgaagccagtgctttaaattcttacctctcaaggttagtgcaaagtacttttgaagac
cttgaggacagtggatgcataaaaatgaatgaaaattctgtggaacctttgatgttgggt
tcagtagcatctcagtattatctgagttacatgacagtatctatgtttgggtcaaacata
ggcccaaatacttcactagaagttttcttgcacattctttctgctgctgctgaatttgat
gaacttcctgtacgtcataatgaggaaaatatcaatagaacattatctgaaaaggttcca
tatcttgttgatcaacaccatcttgatgacccacatgtgaaagcaaatttgctctttcag
gcacacttctcgggcattgaattgccaattagtgactatatcactgatttaaaatctgtt
cttgatcaaagcatccgtattatccaggctatgattgacatatctgcaaatagtggatgg
ctttcaagcacaatgacttgtatgcatcttttacaaatggtcatgcagggtttgtggttt
gaaagagattcatccctgtggatgttgccttgcatgaacaatgatcttctaattcatatc
aagaaagctggtatctcaactctgcaggacctactgggtcttcccagtgccaatttgcag
aggttgctccgacagtttccttcatcagagttataccaggatcttcagcattttccacgt
gttcaagtaaaattgaagcttcaagtggaagatggcaaaaagcctccaagtcttaacatt
agattggaaaaaactaattccaagcgtttgacatcaagagcatttgcccctagattccca
aagataaaagatgaagcttggtggctagttttgggaaatgttaccacctcagagctatat
gctctgaaaagagttagtttctctgacagattgttcactcgcatggagctaccaccaaca
gtgatcaatccccaggaaacgaagctaattctagtatcagattgttatcttggactcgag
caggagcactccataggagaatctgagaatcaattctcataa
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integrated database retrieval system
