Elaeis guineensis (African oil palm): 105056004
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Entry
105056004 CDS
T03921
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04120
Ubiquitin mediated proteolysis
egu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105056004
04120 Ubiquitin mediated proteolysis
105056004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egu04121
]
105056004
Enzymes [BR:
egu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105056004
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
U-box type E3
105056004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
105056004
NCBI-ProteinID:
XP_010936366
UniProt:
A0A6I9S3E6
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All DBs
Position
13:complement(70643169..70663808)
Genome browser
AA seq
1039 aa
AA seq
DB search
MAARKPQRTPEEIEDVILRKIFLVSLANPVENDPKVVYLELTAAEILSEGKALMLSRDSM
ERVLIDRLSGDFPGAEPTFSYLIGCYRRAYEEGRKVASMKDPSVRSEIESAVTQARKLVV
SYCRIHVGNPDMFVPTGGVGGSVTSQLLSLIFSEVSNPMDGFGGNSLGGELSCPPRFLEE
FFRDADAESLEPIMLDLFEKLKQSVDRVSALGNFQQPLRALLLLVGFPNCAQALVNHPRW
IPKETYLLIGEGRVIEIASILGAFLHVSALPDYKEFKSKPDVGQQCFSEASTRRPADLLS
SYTTIRTVMNILYDDLGEVFLALLKNVDTREKVLEYLAEVIKKNSARSRMQVDPILCAST
GMFVNLSAVMLRLCEPFLDAATTKRDKIDVNYLFYNNRLDFKQLTAMHASSEEVAAWIDN
ENCEKTDGHVNNVGEDNRVLESKEATSSGGNGGLSNAKPLMGCSRKSKYSFICECFFMTA
RVLNLGLMKALSDFKHLAQELARYEEDLSTYKAMRDEGASPQLEADIKRLEKAIEILSQD
KLCYEAQILRDGVLLQRTLSFYRLMVVWLVGLVGGFKMPLPSKCPMEFACIPEHFVDDAM
DLLILTSRIPRALEGFVLDDFLNFIIMFMASPSYIKNPYLRAKMVEVLNCWMPQRSGLSS
TASLFEGHQLSLDYLVRNLLKLYVDIEFTGSHTQFFDKFTIRHNIAELLEYLWNVPSHRN
AWRQIAREEEKGVYLNFLNFLINDSIYLLDESLNKILELKEIEAEMANSAEWERRPAQER
EERMRLFHSRENIVRFDMKLANEDVGMLAFTSEQIPAPFLLPEMVERVASMLNYFLLQLA
GPQRKSLSVKDPEKYEFRPKQLLKQIVEIYIHIARGDKENIFPAAISKDGRSYNEKLFAS
AANILRKIGEDGRVIQEFVQLGVKAKEAASEAMDTEAALGEIPDEFLDPIQYTLMKDPVI
LPSSRVTIDRAVIQRHLLSDNTDPFNRSPLTQDMLIPNTELKLRIEEFIRSQVLRKHSQG
NSITGGAAEQADGVTYTEE
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaggaaaccccagcgaaccccagaggagatcgaagacgtcattctccgcaag
atcttcctcgtctccctcgcaaaccctgtcgaaaacgaccctaaagtcgtctacttggag
ctcaccgccgccgagatcctcagcgagggcaaggccctcatgctgtcccgggactcaatg
gagagagtccttatcgatcgcctctccggcgattttcctggcgccgagcccaccttctcc
tatttgatcggctgctatcgtcgggcatatgaggaggggaggaaggtggcctcgatgaag
gacccatcggtccgatcggagattgaatctgctgtcacacaagctcgcaaattggtcgtc
tcctattgcaggattcacgtcggcaatcctgatatgtttgtgcctacaggtggagttggt
ggttctgtgacttcccagctcctgtcgttgatcttctcggaggtttcgaacccgatggat
gggttcgggggaaacagcttaggcggggagttgagctgtcccccaagatttttggaggaa
ttctttagggatgcggatgcggagagcttggagccgattatgttggacctgtttgagaaa
ttgaagcagagtgttgatcgggtttcggcattaggaaactttcagcagccattgcgagca
ctgctgttgttagtgggttttccaaattgtgcccaggctctggtgaatcaccccaggtgg
atcccgaaagagacttacttgctgattggggagggccgggtgattgagatagcgagtatt
ttaggagcttttcttcatgtcagcgcactgcctgactacaaggagtttaagagtaaacca
gatgttggccagcaatgcttttctgaagcatcaacacgtcgtccagctgatttgttatca
tcttacacaacaatcaggacagtcatgaatattttatatgatgaccttggagaagtcttc
cttgccttactgaaaaatgtggatacacgggaaaaagttcttgaatatcttgctgaggtg
attaaaaaaaactcagcaaggtctcgcatgcaggttgatccgatattatgtgccagtact
ggaatgtttgtgaatcttagtgctgtaatgcttcggctttgtgaaccctttctagatgca
gccacaacaaaaagggacaaaattgatgtaaactatttattttataacaatcgtctagat
ttcaaacaattgacagcaatgcatgcatcatctgaagaggttgcagcatggatagataat
gaaaattgtgagaagactgatgggcatgtcaataacgttggggaagataaccgtgtatta
gaatccaaggaagctacaagttctggtggtaatggtggcctttctaatgccaagccattg
atgggttgttcaagaaagagtaaatattcatttatatgtgaatgtttctttatgactgca
agagtacttaacttgggtcttatgaaagcactatcagacttcaaacatcttgctcaggag
ctggcaaggtatgaagaagatttgtcaacctataaagccatgagagatgaaggagcttca
ccccaacttgaggctgatataaagcgtctggagaaagcaattgagatattgtcacaggac
aaactctgctatgaagctcagatactaagagatggggtcctacttcaacgcactctatct
ttctacagattaatggttgtatggttggttggtctagttggtggatttaaaatgccgttg
ccatcaaaatgccctatggaattcgcatgcatcccagagcattttgttgatgatgcaatg
gatttacttattttaacttctcgaatcccaagagctttggaagggtttgtgctggatgat
tttttgaattttattatcatgttcatggcaagtccatcttatatcaaaaatccttatctg
agagccaagatggttgaagtgttgaattgctggatgccgcaaagaagtggcttatcttct
actgcctccctttttgaagggcaccaactatctcttgactacctagttagaaaccttcta
aaactttatgtggacattgaatttactggctctcatacgcagttctttgacaagttcact
attcgccacaatattgctgaacttcttgaatatctatggaatgtgcctagccatcgtaat
gcatggagacagattgctagagaagaggagaaaggagtttatttgaattttttgaatttc
cttatcaatgatagcatttatcttcttgatgagagtttgaataaaattcttgaactcaaa
gaaatagaagcagaaatggctaattctgcagaatgggaaagaaggccagctcaagagagg
gaggagagaatgcgcctttttcattcgcgagaaaatattgttcgatttgacatgaagttg
gcaaatgaggatgttggaatgcttgcgttcacatctgaacaaattcctgctccttttctt
cttccagaaatggtagaaagggtggcaagcatgttgaactacttccttttgcaacttgcc
ggccctcaacgaaaatctctcagtgtaaaggatccagaaaaatatgagtttagaccaaag
caattgctaaagcaaattgtcgagatctacatccatattgcaaggggtgacaaggaaaac
atctttcctgctgcaatctcaaaggatgggcgctcttataatgaaaaactatttgcttct
gcagctaatattttgcggaaaattggtgaagatggaagggtaattcaggagtttgttcag
cttggggtcaaagccaaagaagcagcttctgaagcaatggatactgaggccgcccttggc
gaaatacctgatgaattccttgacccaattcagtacacgttgatgaaggatcccgtcatc
ttaccctcatcaagggtaactatagatcgagcagtcatccaaagacacttgcttagcgat
aatactgatccatttaaccgttctcctctcactcaagacatgctaatacccaacaccgag
cttaagttaagaattgaggagttcatcagatcccaagtgctgaggaagcacagccaagga
aactcgatcactggaggagctgctgaacaagctgatggtgtaacttatacagaagagtga
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