Elaeis guineensis (African oil palm): 105057065
Help
Entry
105057065 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105057065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105057065
03041 Spliceosome [BR:
egu03041
]
105057065
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105057065
Spliceosome [BR:
egu03041
]
Complex B
Other components
Prp19-related factors
105057065
Complex C
105057065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
Mad3_BUB1_I
TPR_12
TPR_19
TPR_15
TPR_2
TPR_8
ARM_TT21
RPN7
ANAPC3
PPR
CKAP2_C
SNAP
TPR_CcmH_CycH
TPR_5
Motif
Other DBs
NCBI-GeneID:
105057065
NCBI-ProteinID:
XP_073104522
LinkDB
All DBs
Position
14:complement(65416119..65422173)
Genome browser
AA seq
912 aa
AA seq
DB search
MATAATMLASEAGISPDLYPSEDDLVYEEEILRNPFSLKLWWRYLVARAGAPFKKRSVIY
ERALKALPGSYKLWHTYLRERLDLVRSLPISHPAYESLNNTFERALVTMHKMPRIWIMYL
TSLTEQRLLTRARRTFDRALRALPVTQHDRIWAPYLALVSLPGVPVETSLRVYRRYLLFD
PSHIEDFIDFLITSQRWQEAAERLASVLNDDSFHSIKGKTRHQLWLELCDLLTRHATEVS
GLKVDAIIRGGIRRFTDEVGRXWTSLADYYVRRGLYEKARDIFEEGLTTVTTVRDFSVIF
ESYAQFEQSALSAKLETVDGSDEEGDQDEENGKDGITKLTKKFLHGFWLNDDDDVDLRLA
RYENLLERRPELLNSVILRQNPHNVKEWHNRVKLFEGNPAKQVLTYTEAVRTVDPMKAVG
KPHTLWVAFAKLYESHNDLENATKIFEKAVQVNYKTVDNLASVWCEWAEMMLRHKNFKKA
LELMRRATAEPSVEVKRRVAADGNEPVQMKLHKSLRLWSFYVDLEESLGMLESTRAVYER
ILDLRIATPQIILNYAFLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYG
KTKLERARELFEHAVEKAPAEDVKPLYLQYAKLEEDYGLAKRAMKVYDQAVKAVPNSEKL
NMYEIYIARAAAFFGVPKTREIYEQAIESGLPDKDVKTMCMRYAELERNLGEIDRARAIY
VFASQYADPRSDPDFWKKWKDFEIQHGNEDTFREMLRISRSVSASYSQTHFILPEYLMQK
DQKLNLEEAVDTLKRAGVPEDEMAALERQLAPAPANVPASDGSRVMNFVSAGVESQPDGR
KVTANNEDIELPEESDSEDENIEIAQKNVPAAVFGDLARNVAEDQDQGAAAEDNANHSNL
GALERIKRQRRQ
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcgacgatgctggcgtcagaggcggggatctcgccggacctgtacccg
agcgaggacgacctggtctacgaggaggagatcctccgcaaccccttcagcttgaagctg
tggtggcgctacctggtggcccgcgccggcgcccccttcaagaaacggtcggtgatctac
gagcgcgccctcaaggccctcccggggtcctacaagctctggcacacctaccttcgcgag
cgcctcgacctcgtgcgctccctccccatctcccacccggcctacgagtccctcaacaac
actttcgagcgcgccctcgtcaccatgcacaagatgccccgcatctggatcatgtacttg
acctccctcaccgagcagcgcctcctcacccgcgcccgccgcaccttcgaccgcgccctc
cgcgccctcccggtcacccagcacgaccgcatctgggccccctacctagccctcgtctcc
ctccccggcgtccccgtcgagacttcccttcgcgtctaccgccgctacctcctcttcgac
ccctcccacatcgaggacttcatcgacttcctcatcacctcccagcgctggcaggaggcc
gccgagcgattggcctccgtcctcaacgacgactccttccactccatcaagggcaagact
cgccaccagctctggcttgagctctgtgacctcctcacccgccacgccaccgaggtctcc
ggtctcaaggtcgatgccatcatccggggtggcatccggcgcttcaccgacgaggtcggc
cgcncttggacgtccctcgccgactactacgtccgccgggggctctacgagaaggcccgt
gacatcttcgaggagggcctcaccaccgtaactactgtgagggatttcagcgtcatcttc
gagtcctatgcccagttcgagcagagcgcattatctgcaaagcttgagacggtcgacggc
tcggatgaagagggggaccaggacgaggagaatggcaaagatggcatcacgaagcttacg
aagaaattccttcatggcttctggttgaatgacgatgacgatgtggatctcaggttggct
aggtacgagaacctcttggaaaggaggccggagctcctcaacagcgtcatcttgaggcag
aatcctcacaatgtgaaggagtggcacaaccgagtaaagcttttcgagggcaatcctgca
aagcaagtgttgacgtatacagaggcagtgagaactgtggatcccatgaaagcggtgggg
aagccccacacattgtgggttgcttttgcaaagctgtatgagagccacaatgatctcgag
aatgctacaaagatatttgagaaggctgtacaagtgaattacaagacagttgataatctg
gctagtgtgtggtgtgaatgggcagagatgatgctgaggcacaagaactttaagaaggca
ctggaactcatgaggcgggcaactgcagagccctctgtcgaggtcaagcggagagttgct
gctgacgggaatgaaccagtgcagatgaagttgcataaatctctgaggctgtggagcttt
tatgtggatttggaggagagcttaggaatgttagaatccactcgtgctgtttatgagaga
atacttgatttgagaatagctaccccacaaatcatacttaactatgcttttcttcttgag
gagcacaaatactttgaggatgcatttaaggtgtatgaaagaggtgtaaagatctttaaa
tacccccatgttaaagatatatgggtcacttacctctccaaatttgtgaaaagatatgga
aaaaccaagctagaacgggcaagagaactatttgagcatgcagttgaaaaggcacctgca
gaagatgtgaagcccctttatctgcaatatgcaaaactggaggaagattatgggcttgca
aagcgcgcaatgaaagtttatgatcaagctgtgaaggctgtccctaatagtgaaaaattg
aacatgtatgaaatttacattgctcgagctgccgcattttttggtgttccaaaaacaagg
gagatatatgagcaagccattgaatccggtctccctgataaggatgtaaaaacaatgtgc
atgagatatgccgaacttgaaaggaacttaggagaaattgatcgtgctcgtgccatatat
gtgtttgcatcacagtatgcagatccacggtctgatcctgatttctggaaaaaatggaaa
gattttgagatacaacatggtaatgaggatacctttagagaaatgcttcgtatcagccgt
agtgtctcagctagctacagtcagacacatttcatcctccctgagtacctgatgcaaaag
gatcagaagctaaatctagaagaagctgtggacactctaaagcgtgctggggttccagaa
gatgaaatggctgctttagaaaggcaattggcacctgcacctgctaatgtacctgctagt
gatggtagcagagtgatgaactttgtgagtgctggagtagagtcacagcctgatgggagg
aaggttactgcaaataatgaggatatcgaattgccagaagaaagtgactctgaggatgag
aacattgagatagcccaaaagaatgttcctgctgccgtatttggagaccttgcccgcaat
gttgctgaagatcaggatcaaggtgctgctgctgaggataatgcgaaccacagtaactta
ggtgcccttgagagaataaaaaggcaaagacgacagtag
DBGET
integrated database retrieval system
