Elaeis guineensis (African oil palm): 105057159
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Entry
105057159 CDS
T03921
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03440
Homologous recombination
egu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105057159
03460 Fanconi anemia pathway
105057159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egu04121
]
105057159
03036 Chromosome and associated proteins [BR:
egu03036
]
105057159
03400 DNA repair and recombination proteins [BR:
egu03400
]
105057159
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105057159
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
105057159
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
105057159
FA (Fanconi anemia) pathway
Downstream FA components
105057159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
105057159
NCBI-ProteinID:
XP_019710275
UniProt:
A0A6J0PQZ5
LinkDB
All DBs
Position
14:64135433..64150675
Genome browser
AA seq
1277 aa
AA seq
DB search
MPTSRDLSTWQILPTDGAHFQWSAAGGDPGRRLEQPPPETLVLGEENHPDSRLPSMADLV
IQARQKLIEGGDGDRRGVPMFRTGSGRSVSVSESSIRKATSVLGGGDTTVREDGGGAEGF
PIFRTCYGKSVTVKESSMRRAAAVLEGVDMEKGSAASLVDGGAECLPIFRTGSGKSVTVR
QSSIRKASAVLEAEGMNKGAATVLEGGGGDGGFPMFRTGSGKSVMVSQSSIRKAAAVLEG
ENIKNDQLHKYSVDGNCSFSDSLFHIATGKTVNLSSAGLLRASSLLGLEGNNDPSTLQYF
KHAMDHLDARITTPRESHAKLGCDVNSGTTGSVRIDPMGAQLVQRNSHDCPKDFCLSGNQ
LAKDSLQSPLGSELHSSDSIQMHIKFHTAGGRSILISSDALQRARSLLVDSDSEVLQNDE
KADQPSFLILKDENDRGKTFLNKENIMSVHQNARKSKSVSESLPCIQSFSNQKESSCPLQ
AINSLGVMIDQVNNSNFVMENFHHSSSEKSHMQKPSNKDLCVTHTVIDSVNMIPECRPSG
GTLVDISNNISWDHANINWLSSEKKRLGRRSSVSPFKRPRSSRFTTPLNSSISSLATDSS
MLSTTENCCRRVKLSSHYPFQFKRKNIKDFFGKCTSQQSMLAHLPDEVKRLNADNALKYR
FHDEYGRYEIGSEAFQNMLLQSGASSLSATKEWVANHYKWIVWKLASLERCYPVQASGNY
LTVSNVLEELKYRYEREVNYGHRSAIKKILDGDASPSSMMVLCISAIHCSETKICKIDDM
TGPNEDNNKLTSSIMVESSRKRIELTDGWYSLDAFLDVLLSKQLRIGKLFVGQKLRIWGA
GLQGWVGPVSPLEASKTVSLLIHINGTYRAHWADPLGLCKGLGAPLAFSCIKAGGGKVSR
TLVGITRIYPVSYKERFPDGGSVVRSERMEHKALQLYQQRRSKIVEDITSDQQDVFDNVN
DSDEGANILKILETAAEPEVLMADMSSEQLISFSAYQAKQKALRQSYIQKKIEKSFEDAG
LSSREVTPFMRVRVVGLTSKGSCRKRQPREGLITIWNPTEKQKVDLVEGKIYTVAGLMPL
NFGTNVLYLQARGSSTVWKPICATQTDKFEPFFTPRKSITLSNLGEVPLASEFDIAAVIV
HVGEVYISGCQKKQWIFMTDGSTCSSESLFEGQYDRLLAVSFCSPMIDNDSSALFSHTYS
ESTAGFFNLTKRARDQMNHLWVAEATENSAYCVSYNLPSRLHLKEAADSAQRWAKVSYWA
IQKLRERVLSIIGGQGS
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtcgcgggatctatcgacgtggcagattcttccgaccgatggcgcccacttc
cagtggagcgccgccggcggagatcctgggcgccgcctggaacagccgccgcctgaaacc
ctggttcttggcgaggagaaccaccccgattctcgcctcccatccatggcggatctcgtg
atccaagctcgccagaagctcatagaaggtggtgatggagatcgtcgtggcgtgccgatg
ttccgtacgggatcgggacgatctgtttcggtgagtgagagttcgattcggaaggcaacg
tctgttcttggaggaggagatacaaccgttcgagaggatggtggtggtgctgagggcttt
ccaatatttcgtacttgttatgggaagtcagttaccgtgaaagagtcttctatgaggagg
gcagcagctgttcttgaaggagtggatatggagaaaggatctgcagcaagtttagtggat
gggggtgctgagtgccttccaatatttcgtactggttctgggaagtcagttacagtaagg
cagtcttctatcaggaaagcatcagctgttcttgaagcagagggtatgaacaaaggagct
gcaacagttttggagggtggtggcggtgatgggggttttccaatgtttcgtactgggtcg
ggaaagtcagttatggtgagtcagtcttcaatcaggaaggcagctgctgttcttgaagga
gaaaatattaagaatgaccagctgcacaaatattcagtggatggaaactgcagtttctct
gattcccttttccacatagccactggtaaaactgtaaatttatcttctgctggtcttctt
agggcttcttctttgttgggtttggaggggaataatgatccttctactctacaatatttc
aagcatgcaatggatcatttggatgccaggataactactccaagggaatcacatgcaaag
cttggatgcgatgtgaattctggtaccactggctcggttagaattgaccctatgggtgca
caattagtccaaagaaattcacatgattgtccaaaggatttttgcttatcaggaaatcag
ttagctaaagattcacttcagagtcctctggggtctgaattgcattcatctgattctatc
cagatgcatattaaattccacactgcaggtggaagatctatactgatttctagtgatgca
ttacagcgtgcaaggagccttcttgttgattcagactctgaagttctacagaatgatgag
aaagcagatcaaccatctttcttgattcttaaagatgagaatgatcgtggcaagactttt
ttgaataaagaaaacatcatgtctgtgcaccaaaatgctagaaagagcaaatccgtgtca
gaatccttaccttgcatacaatcattttccaatcaaaaggagtcatcatgtccccttcag
gctatcaattctctgggtgttatgatagatcaagtgaataacagtaactttgttatggaa
aactttcatcattcaagcagtgaaaagtctcacatgcaaaaaccttcaaacaaagaccta
tgtgttactcataccgtcattgactctgtgaatatgattccagaatgcagaccatcaggt
ggaacactggttgatatttcaaataacattagttgggatcatgcaaatataaattggctt
tctagtgaaaagaaaaggcttggaaggagaagctctgtctctccatttaaaaggccacga
agttctaggttcaccactcctttaaacagcagcatctcttccttggctactgattcatcc
atgttatctacaacagaaaattgctgtcgcagagtgaagctgtcctctcattatccattt
caatttaagcggaagaatattaaggatttctttggcaaatgcactagtcagcaaagcatg
ttggcacacctaccagatgaagtgaaacgcttgaatgcagataatgcactgaagtacaga
tttcatgatgaatatggtcgctatgaaattgggtcagaagcctttcaaaatatgctgctt
cagtctggtgcttcatcattaagcgcaactaaagaatgggttgcaaaccactacaaatgg
attgtttggaaacttgcaagccttgagcgatgctatccggttcaagctagtggcaattac
ttaacagtttctaatgtgcttgaggaattaaagtacaggtatgagagagaagtcaactat
ggccatagatcagcaataaagaaaattctagatggggatgcatcgccttcttctatgatg
gttctatgtatttcagcaatccattgttctgaaacaaagatctgtaaaatcgatgatatg
actggtccaaatgaggataacaacaagcttaccagctcaattatggttgaaagcagccgc
aagagaattgaacttactgatggatggtattcattggatgctttcttagatgtattactg
tcaaaacaactccgtattggaaagctatttgttggccagaagcttcggatctggggtgct
ggtttgcaaggttgggttggacctgtttcaccccttgaggcatcaaaaacagttagttta
ctgatacacattaatgggacgtatcgggcacactgggctgatccattgggattatgcaag
ggtcttggagctccattggcttttagctgcataaaggcaggtgggggtaaagtttcaagg
acattggttgggattacaaggatttatcctgtttcatataaggagaggttccctgatggt
gggtctgttgtgagatcagaaaggatggaacataaagcacttcaactgtaccaacagaga
cgatcaaaaattgtagaagatattacgtcagaccaacaggatgtttttgacaatgttaat
gatagtgatgaaggggcaaatattttaaagatccttgagaccgctgctgagcctgaagtg
ttaatggcagatatgagttctgaacaactaatttctttttcagcttatcaggcaaagcaa
aaggcactcaggcagtcttatattcagaagaagattgagaaatcttttgaagatgcaggc
ctcagttcgagggaggtaaccccctttatgagagtgagggtagtgggattaaccagtaag
ggctcgtgcagaaagcgccaacccagggaaggcttgataacaatctggaatccaactgaa
aagcagaaagttgatcttgttgaaggaaagatatatactgttgctggacttatgccactg
aactttggtaccaatgtcctttacttgcaagctagaggatcttctacagtatggaaacct
atctgtgccacacagactgataaatttgaaccatttttcacccctcgcaaatcaattaca
ctgtcaaatttgggtgaggtacctcttgcaagtgagtttgatattgcagctgtaatcgtg
catgtgggagaggtttatatatctggatgccagaaaaagcagtggattttcatgactgat
ggatccacatgcagttcagaatctctgtttgaaggacaatatgatcgcctgcttgctgtc
agtttctgttcacccatgattgacaatgattcatctgcgcttttcagccatacctattca
gaaagcacagctggcttctttaatcttaccaagcgagcaagggaccaaatgaatcatctt
tgggtagcagaggcaacagaaaattctgcatattgtgtatcctataaccttcccagcaga
ttacatctcaaggaagcagcagactctgctcagagatgggcaaaggtatcatattgggct
attcagaagcttcgggagagggttttatctattattggcggtcagggaagctag
DBGET
integrated database retrieval system
