Elaeis guineensis (African oil palm): 105057160
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Entry
105057160 CDS
T03921
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105057160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105057160
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105057160
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
DEAD
Motif
Other DBs
NCBI-GeneID:
105057160
NCBI-ProteinID:
XP_010937951
UniProt:
A0A6I9S6E2
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Position
14:64124511..64134275
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AA seq
1211 aa
AA seq
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MLKRPPSRCSHPIDVTPFEAFYDGSWHGTKHVSIKTGSIFVQFNHGGSMLEDKIHGDCLR
MRSRKASSFDCSHFLKPGIDVCVLSALPVATSSEEELQTPLLSWHDAKIISIKKAPHVNR
CACLFSVAYCKSNSPTSMKRSTNERMAEVVTIDNITILQKLKNEPCENGFYQWNSTEDCI
SSSKSKLLSDAFSSEISWLLVLSTLKRMDFDLRLMQNRIVYYILYSDGKSSITDVQSDGD
SDVVSPSSDKSIKVMCFQRLNEYLQPKVETFVLGTHKEMPVPERTTEMDTNDSDADNDPD
VEILYDHMNLRHSKRRKTQPDRFSSYCSPNFDRCSIRNVTCEMNRMEQDETPTPNSSRSG
LSAEEEPTAATMQQMNIYEGKSMKLHLHHSLVQNKMKPKDLCKRVQGGIVSSLSNKFDHL
SSQSYQKKGSNRKKLLSAAECKHLIEKCIGNIKCETERNIEPVVQWLTQKTTNFPEEPPY
FRWTPSVDTQLENEEHEDLWKEMEQSLTTLALLEQNKVLDSKFLDGSTDSSMRDPEQLEC
HHDYTLKEDIGVICRLCNFICTEIRYVSPPFGDYSVAWKEKFGVKKLGIMGLYDLESDPL
GEAISSWDISLSEGCDDIWTLIPDFKSKLHAHQKRAFEFIWRNIAGSLKPEEMNHQSGNT
GGCVISHSPGSGKTLLIISFLVSYLKLFPRSRPLVLAPKTAVHTWCREFQKWEVPIPLYL
IHREQGYGKELSASKIRMFSIDARRPNRKMMHIMSCVEKLRMWHEEPSILLMNYSSFFSM
AKEDSNLEYRRFMAGILQKSPGLLILDEGHNPRSTNSKLRKLLMKVKTEYRILLSGTLFQ
NNFEEYFNTLSLARPRFIHDAISELDPYMVNIFHSRKHKREKKKNRKERLARKLFVEKVG
QKIESSEEDDRKQGLDLLNRITSGFVDVHEGEILNRLPGLQIYTLLLSSTDLQRQILTKL
QNSVTHKRCPLELESLVTVGSIHPWLIKTIAGVDNYFSVDELKNVDALKENYMCGPKVKF
VIDLVHKSTSKGERVLIFCHNISPMNLLVQYFELVFGWHREEEVLVLQGDQELSMRAKIM
DKFNGDVKGKSKVLLASTTACAEGISLTAASRLVMLDSEWNHSKTRQAIARAFRPGQERV
VYVYLLLASGTWEEGKYESNARKAWMSKMIFIGQYIEHGSSRQADDIDDELLRELVEEDQ
RKTFQMIKKHD
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaagaccaccttctcgctgcagccatcctattgatgtgactccttttgaggca
ttttatgatgggtcttggcatggaaccaagcatgtgagcatcaagactggaagtattttt
gttcaatttaatcatggaggatctatgctagaggataaaatccatggtgattgtctacgt
atgcggtctagaaaagcaagctcatttgattgctcacatttcttgaagcctggtatagat
gtctgtgtgctttcagctcttccagttgcgacgagttctgaggaagaactacagacacct
ttgctttcatggcatgatgccaaaattatctcaatcaaaaaagctcctcatgtcaatcga
tgtgcctgcttattttctgtggcctattgcaagagcaattccccaaccagcatgaaaagg
agcacaaatgaaagaatggctgaggtagttacaattgataatatcaccatacttcaaaag
ctaaaaaatgagccttgtgaaaatggattctaccaatggaattctactgaggattgtatc
tcttccagtaaaagtaaacttctcagtgatgcattttcttctgaaatttcatggttgctt
gtattatctacattgaaaagaatggattttgacttgaggttgatgcagaacaggatagtt
tactatattctttacagtgatggaaaatccagtataactgatgttcaatcagatggtgat
agtgatgtagtgtctccaagctctgataagagcataaaggtcatgtgttttcaaagatta
aatgaatatctgcaacctaaggttgaaacttttgtcttggggactcataaggaaatgcct
gttccagagagaaccactgagatggacacaaatgatagtgatgcagacaatgatccagat
gttgagattttatatgatcacatgaatttgaggcattctaaacgtcgcaagacacagcca
gatcgatttagtagttattgttcaccaaattttgatcgttgctctatcagaaatgtgaca
tgtgaaatgaacagaatggaacaagatgaaacaccaactcctaattcttcaagatctggt
ttgtcagcagaagaagaaccaactgctgcaaccatgcagcaaatgaacatatatgagggg
aagagtatgaaacttcatttgcatcattctctagtccaaaataaaatgaaaccgaaagac
ttatgcaagagagttcaaggaggaattgtctcctcattatctaataaatttgatcatctc
tcttcccagtcatatcagaaaaagggctcaaacagaaagaaattactaagtgcagctgag
tgcaaacatttgattgaaaagtgcatagggaacatcaaatgtgaaactgaaagaaacatt
gagcctgttgttcagtggctaacacaaaaaacaacgaacttcccagaagagccaccatat
tttaggtggacaccatcagtcgatactcaacttgagaatgaagagcatgaagacttgtgg
aaagaaatggaacaatcattaaccacacttgcccttcttgaacaaaacaaggtattggac
tcgaaatttcttgatggctccacagacagttcaatgagagatccagagcagctagagtgc
catcatgattacacgctgaaggaggatattggagttatttgtcggctatgcaactttata
tgcactgaaataagatatgtttcaccaccatttggtgattattcagttgcttggaaagag
aaatttggtgtaaaaaaactgggcatcatggggctatacgatttggaatcagatccttta
ggtgaggctatttcctcatgggacatttcattgtcagaagggtgtgacgatatatggact
ttaataccagattttaagtcaaaattacatgctcaccagaagagagcttttgaatttata
tggaggaacattgctggatctttgaagccagaagagatgaatcatcagtcaggcaatact
ggtggctgtgtgatctcccattctcctgggtcaggaaaaacgctactcataatttcattt
cttgtcagctacttgaagctgtttcctcgaagccgacctctagtgcttgctcccaagact
gcagttcatacctggtgcagagagtttcagaaatgggaggttccaattcccctatacctg
attcatcgggaacaaggctatgggaaagaattgtcagccagcaaaattagaatgttttct
atagatgctcgcaggccaaacagaaaaatgatgcacattatgagttgtgttgaaaagtta
aggatgtggcacgaagaaccgagcattcttcttatgaattactcatcttttttttccatg
gcaaaagaagattcaaatcttgaatataggaggttcatggcaggcatattgcagaaaagc
ccagggcttttgattctagatgaaggtcacaacccaagaagcacaaattccaagttgaga
aagcttctgatgaaagtgaagactgaatatagaattcttctatctggaacattatttcaa
aacaactttgaagaatatttcaacaccctatctttagcaagacctcgctttattcatgat
gctataagtgaattggatccatatatggtcaatattttccatagcagaaagcacaagcga
gaaaagaaaaaaaatcgtaaagagagattagctagaaaactttttgtagaaaaagttggc
caaaaaattgagtcaagtgaagaagatgatagaaagcaaggtttagatttgttaaacaga
atcacgagtggatttgttgatgttcatgaaggtgaaatattaaataggcttcctgggttg
caaatctacactctcctgttgtcatcaacagatctccagcgacaaatcttgacgaaacta
caaaactcagtgacacataaaaggtgcccacttgagctggagtcactagtcacggttggt
tctatccacccatggctgataaaaacaatagcaggtgtagataattatttcagtgtagat
gagttaaagaatgttgatgcattgaaagaaaactacatgtgtggtcctaaagttaagttt
gtaatagatcttgtgcacaaatccactagcaaaggggagcgagttctgattttctgtcac
aatatctctccgatgaacctgctcgtacagtattttgagctagtttttggatggcatagg
gaagaagaagtcttggtgcttcaaggtgatcaggagctgtctatgcgtgcaaaaatcatg
gataagttcaatggagatgtcaagggaaaaagcaaggttttgcttgcatcaaccactgct
tgtgctgaaggcatcagtttgacagcagcatcaaggttggttatgttggactcagagtgg
aatcactcaaagacaaggcaagcaattgctcgagcattcaggccaggtcaggagagagtg
gtgtacgtttatctgctattggcatcagggacatgggaagagggcaagtatgaaagcaat
gcacggaaggcctggatgtcaaagatgattttcattggccagtacattgagcacggttct
tctaggcaggctgatgatattgatgatgaactgctgagggagctggtggaggaagatcag
agaaagacattccagatgataaagaaacatgattaa
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