Elaeis guineensis (African oil palm): 105057334
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Entry
105057334 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: phytochrome B-like
KO
K12121
phytochrome B
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105057334
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
PAS_4
HisKA
HATPase_c
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
105057334
NCBI-ProteinID:
XP_010938231
UniProt:
A0A6I9SEQ1
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Position
14:60976280..60982836
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AA seq
1112 aa
AA seq
DB search
MASSGSSRPTQPPRSEAMSKKAMQYTADAQLHAVYEQSGESFDYSQSVRVATPSQSVPEK
QITAYLSKIQRGGCIQPFGATLAVDEHSFRLLAFSENAPDLLDLPHSVPSLDPSSPHRRL
ALGSDVRSLFTPXSALLLDRAASAREITLLNPLXSTPTLGKPFYAILHRIDVGIVIDLEP
ARSEDPALSVAGAVQSQKLAVRATSRLQSLPGGDIKLLCDTVVDLVRELTGYDRVMVYRF
HEDEHGEVVAENRRDDLEPYLGLHYPATDIPQASRFLFKQSRVRMIADCNATPVRVIQDE
SLMRPLCLSGSTLRAQLGCHAQYMANMGSIASLVLAVVISDSGDDVGINRSATKLWGLVV
CHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHILRTQTLLCDMLLRDSPT
GIVTQTPSIMDLVKCDGAALYYQRKYWPLGVTPTEAQIKDIVEWLLACHGDSTGLSTDSL
ADAGYPGVAALGDAVCGMAVVYITPRDFLFWFRSHTAKQIKWGGAKHHHEDKDDGQRMHP
RSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFREAGEGTSGSKAMINSQFGEVEL
QGIDELSSVAGEMVRLIETAIAPIFAVDADGRINGWNAKVAELTGLPVEEAMGKSLVKDL
VFNESADVVDNLFYRALRGEEDKNVELKLKTFGSQHSMNAIFLIVNPCSSRDFTNNIVGV
CFVGQDVSGQKLVMDRFIRIQGDYKAIVHSPNTLIPPIFASDRNSYCSEWNTAMERLTGW
SREEMIGKLLAGEVFGSCCRLEDPDALTEFMVVLHNAIGGQETDKHPFAFFDKNGKFVQA
LLTANTRGNVDGQEVGAFCLLQTASPQLQQALEIQRQQEKKCYASMKELAYICQEMKNPL
AGIRFTNSLLEMTDLSDDQKQFLETSGSCERQMMKIMEDTNLQSIEDGSLMLHKGEFLLG
SVINAVVSQVMILLREKGLQLIRDIPEEIKMISVYGDQVRIQQVLADFLPNMVRHAPSPD
GWVEIHVNQVXKQNSDGTEVVFFQVRIVCPGDGLSPELVQDLFHNSRWVTQEGICLSISR
KILKLMKGVVQYIRESERCYFLISMELPTCQS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccggcagcagccggccgacgcagcccccgcggtcggaggcgatgagcaag
aaggcgatgcagtacacggcggacgcccaactccacgccgtctacgagcagtccggcgag
tccttcgactactcccagtctgtccgggtggcgacgccgtcgcagtcggtcccggagaag
cagatcaccgcctacctctccaagatccagcgcggcggctgcatccagcccttcggcgcc
accctcgccgtcgacgagcattccttccgcctccttgccttctccgagaacgcccccgac
ctcctcgacctgccccactccgtcccctccctcgacccttcctcccctcaccgccgcctc
gccctcggctccgacgtccgctccctcttcacccccntctccgccctcctcctcgaccgt
gccgcctccgcccgcgagatcaccctcctcaaccccctctgatccactcccactctcggc
aaaccattctacgccatcctccacaggatcgatgtcggaatcgtcatcgacctcgagccc
gcacgcagcgaggaccccgccctctccgtcgccggcgccgtccagtcccagaagctcgcc
gtacgggcaacctcccgcctccaatccctcccgggcggagacatcaagctcctctgcgac
accgtcgtcgacctcgtccgcgagctcaccggctacgaccgcgtcatggtctacaggttc
cacgaggacgagcacggcgaggtcgtcgcggagaaccgccgcgacgacctcgagccctac
ctgggcctccactaccctgccaccgacatccctcaggcctcccgcttcctcttcaagcag
agccgcgtccggatgatcgccgactgcaacgccacccccgtccgggtgatccaagacgag
agcctgatgcggccgctctgcctctcgggctccaccctccgtgcccagcttggctgccac
gcccaatacatggccaacatgggctccatcgcctccctcgtcctggccgtcgtcatcagc
gacagcggcgacgacgtcggcatcaaccgcagcgccaccaagctctggggcctcgtcgtc
tgccaccacacctccccccgctgcatccccttcccgctacgctacgcctgcgagttcctc
atgcaggccttcggcctccagctgaacatggagctccaattggcctcgcagttgtccgag
aagcacatcctcaggacccagaccctgctctgcgatatgctcctccgtgactcgcccact
ggaatcgtcactcagacccccagcataatggacctcgtcaagtgcgatggagcggcgctg
tattaccagcggaagtactggcctctcggcgtcactccgacggaggctcagataaaggat
attgtggaatggctgttggcctgccatggcgattctacggggctgagcaccgacagtttg
gcggatgctggctacccgggggtggcggcgctcggggatgcggtctgtgggatggccgtg
gtatatatcacgccgagggacttcttgttttggttccgatcgcacactgctaagcagatc
aagtggggtggtgcgaaacatcaccacgaggacaaggatgatgggcagaggatgcaccct
cggtcgtcattcaaggcgttcttggaggtggtcaagagcaggagctctccgtgggagaat
gcggagatggacgccatacactcattgcagctcattctaagggattcttttcgggaagcc
ggggaggggactagtggttcgaaggccatgatcaatagtcagttcggggaagtggagttg
caaggaatagatgagctcagctccgttgcgggggagatggttagattgattgagaccgca
attgcacccatttttgcggttgatgccgatgggcgtataaatggttggaacgcgaaggtt
gctgagttgacagggctgccggtggaggaagctatgggtaaatcactggtcaaggatctt
gtcttcaacgagtctgcagatgttgtcgacaaccttttctatcgagccttgagaggtgaa
gaagataagaatgtggaactaaagctgaagacatttggctcgcagcattcgatgaatgct
atttttctcatagtaaatccttgttctagcagggatttcacaaacaatatcgtaggtgtg
tgctttgttggccaggatgtttcgggacagaaactggtcatggatagattcattcgcata
caaggtgattataaggctatcgtacatagtcctaacactctgattccccctatatttgct
tcggataggaattcatattgctcagagtggaatacagcaatggaaagactaaccggttgg
tccagagaggaaatgatcggaaagcttctcgccggagaagttttcggcagctgctgtcga
ctcgaggatccagatgcacttacagaattcatggttgtccttcacaatgccattggagga
caggaaacagacaagcacccgtttgcattctttgacaagaatggaaaatttgtacaggcg
cttctgacagcaaatacaagaggtaatgtggatggccaggaagttggtgccttttgcttg
ctgcagacagctagccctcaattgcagcaggctcttgaaatccagcggcagcaggagaag
aaatgctatgcaagtatgaaagagctggcttatatttgccaagagatgaaaaatccactt
gctggtattcggtttacaaattcgctgttggagatgacagatttaagtgatgatcagaag
caattccttgagactagtggctcctgtgagagacagatgatgaagattatggaggacaca
aatctacaaagtattgaggatggctcgttgatgctccacaaaggtgaatttctgcttgga
agtgttataaatgctgttgttagccaagtgatgattttgctaagagaaaaaggtttacaa
ttaattcgggatattcctgaagaaattaaaatgatttctgtatatggggaccaagtcaga
attcagcaagtcttggctgactttttgccgaacatggtgcggcatgcaccatcaccagat
ggttgggtggagatccacgttaaccaagtcntgaagcagaattctgatggaacagaagtg
gtgtttttccaagtcaggattgtttgccctggtgatggcctttcaccagaactagtgcaa
gatctgttccataactccagatgggtgacccaggaaggcatttgtctgagcataagcagg
aagatcttaaaactgatgaagggggtagtacagtatatcagggagtcagagagatgttac
ttcctcatctctatggaacttcccacttgtcagagttga
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