Elaeis guineensis (African oil palm): 105057615
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Entry
105057615 CDS
T03921
Name
(RefSeq) uncharacterized protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egu03009
]
105057615
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105057615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
CEP104-like_TOG
NYD-SP28
Motif
Other DBs
NCBI-GeneID:
105057615
NCBI-ProteinID:
XP_010938573
UniProt:
A0A6I9S6Y6
LinkDB
All DBs
Position
2:complement(81753409..81780942)
Genome browser
AA seq
2721 aa
AA seq
DB search
MATSQSQAVKCLNTSFGRRRFVFKSFSQRVEEIDIDVFRSLEPIKTQPSNGSSFFRESLM
QWRELNTAEDFISFYEEMVPLVQTLPQVILHKEKIISELLRRLNMKARLSLEPILMLVAA
LSRDILEEFLPFLQRFTGSLLDLLKGGADRDPEILEQVFTSWSYILMHLQKYLVKDVVHI
LKITVRLRFFSRDYIQEFMAESVSFVLRNAPINQLTKGIRKLIFEVAKTSSSVRITGVAA
LLWHVMRGSSSRLHSRAEKVLQFLMDKSIVSIRNEYPQGMEAFLEVVTGILHRLCSELDH
KELKVVYDCLFREISGCISDGCFVHLNHILGLLTFTIHNSNNSRVFDNQKMFELIKLLIQ
AYITPADCSKSEDISSEVHDRILQLMICLLDVPLTSDELSSISLLYAPAFKLRSSSLFDF
IKGVLLKDPHIAHVFRSHIISAMDDSIEDSSNEVLFLMLTFLERQSKQLHFDILDGVPVD
KEQKICMFFNKTIVYWTNLISDVATSGNQLEKQISESEVAILWGVLRCYPHFQELPDNLA
LIKDLIATLDQLLELEADQLATLPKSTWQSLLGAALSSYHKLLPIKQLRHSETSDFLRLA
KRHKTSPQVLSAVAEFLDSVFCDKSMDEDSAQDVLPEFDVQETVASVCAFADNLGLPHKA
IRISTLKILSHYAPLDRQLPTSDERPHKKLKTDKSGSANEDTQCPNVIELLLLAETTPIS
VSTSRKITILISRIQMGLSSATVNDGYIPLLLYGIIGILHNRFGLLWEPALECLTILIGR
YKELVWNIFIQYLGNYQSKFLSSSDQLMKVNLESPQPIDLGGCFNRFLYPDSDSTPCMTI
TTLLLQSLQKIPDIAESRSRQLIPLFLKFMGYDDENILSVESFNWHKCKGKAWKLILKEW
LNLLRLMRNARSLYRSLVLKEVLMKRLLDDIDPDVQLKVLDCLLNWKDDFLTPYDQHLKN
LINSKNLREELTTWALSKESQHIQEGHRGHLIPLIIRLLTPKVRNLKALGLRKHTGLNHR
RAVLYFLAQLDVDELQLFFSLLLKPLLADTMEVLEDQPDRSSEKFTDGFHSSVFPKFSTL
VTVSNLSWKKRTGFLHVVEDILKTFDEFRVKPFLNPLMMIVVQILENCMLNIMGDNGKRG
GSLGDNSAGDSEVHETSTLVPDPLMMNTSIKQFKDLRSLCLKIISFALGRYEFHDFGSDF
WDIFFVSVKPLIDSFKQEGSSSEKPSSLFLCFIAMSRSPMLVLLLIREANLVPTIFSILT
VKTASDAIISSVLNFIENLLNLDSDLDHQEDNSVKSVLVPHLEILIHSLYELFQSRKDSH
RKSTVCPGKTELRIFKLLVKYINDAAASGFIGILLPFFKKRDISTDECMEGLHVIKAVLP
VLDYETSGKILKAINPLLVSAGLDLRLCICDVLDGLAMINPSLAFLATLLHELNAVSSSE
IGELDYDKRIGAYDTIRPELFTQLREEHALAVLSHCIYDMSSDELIFRQSASRALLSFIH
FAGSIVNGETSDCRELHVHDGAQEDATDQTVEKNNTSSTWTKACVQQIVKKTLLQNMGEA
MSKDISIQKEWIALLREMVYNLRGIPSLNTFRPLCSEDPEVDFFNNILHLQIHRRRRALS
RFRNVISAGKLAENVTAKIFLPLFFNMLFDVKDGKGEDLRNACLETLASMSGQMDWETYR
TFLMRCFREMTLKPDKQKILLRLICAVLDMFHFTSVNSRQVIDGVELCASGDTERNVGIA
SPASSSESNVPSDIAVYLQKKFLPQVLKLLTSESEKVNVNVSLAAIKLLKLLPVETLESQ
LSSIIHHTCNFLKNRLESLRDEARAALAACARELGLEYLHFLVKVLQAILKRGYELHVLG
YTLNFILSKTLVHPTIGKLDYCLEELLLVAENDILGDVAEEKEVEKFASKMKETRKNKSF
DTLKLISQSITFRTHASKLLSPINAHLQKQLTPKTKGKLEMMLHHIALGIEHNPSVELSE
LFIFVYGLIEDSITEEGGHGKEISMNATSNKPLHEMLNKKNTLNSGDHGLQNSHLIAEFA
LGVLHNRLKNIKLDKKDEQLLSMLDPFIKLLGTCLNSKYEKVLSAAFRCLAPLIRLPLPS
LEAHADKIKILLLDIAQKSGNANSSLVQSCLKLLTVLLRSTKISLSNDQLHMLIQFPLFI
DLQTNPSPIALSLLKSIVGRKLVVHEIYDIAVRVAEVMVTSQSEPIRKKCSQILLQFLLD
YRLSDKRLQQHMDFLLTNLSYEHSSGREAVLEMLHAILVKFPKSVVDSQAQTFFLHLVVA
LANDRDQKVQSMVATVIKVLIGRTSRHALHSILDYSLSWYLSEKKHLWSAAAQVLGLLVE
VLRKDFHRHISSILQVTKGIFKSSMHAVNKEFDFANDPSIPFWKEAYYSLVMLEKMLLQF
PELYFDKNLEELWGWICKLLLHPHVWLRNISNRLVALYFAAVSDPGRTDIEKLNIGTLFL
VKPSKLFAVAASLLNQLKLQLDDDAACNLITQNLVFSVCGLHSFAKQRNSLTLHEFWCTL
DSCEQGSYLEAFELLGSRKIKNAFLLSTSNTSQSSAERELAHEDDAENFQSLLVAPLLKR
MGKVAMQKEDIQMKIIFNCFRMISSQIGSEGCNAYAIHMLVPLYKVCEGFAGKVIGDEIK
QLALEVRDSIRDVLGVDEFVRVYNLIRKNLKGKREKRKQEQKLVAVINPMRHAKRKLRIA
AKHRAHKKRKILAMKMGTWRR
NT seq
8166 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgcagtcacaggcggtgaagtgccttaatacgtccttcggccgaaggcgc
ttcgtcttcaagagcttctcccagcgagtggaggagatagatatcgatgtcttccgtagt
ctggagccgataaagacccagccctccaatgggtcctctttcttccgcgagagcttaatg
cagtggcgagagctgaacacggcggaggattttatttcgttttatgaggagatggtgccg
ttggtgcaaacgctgccgcaggttatacttcacaaggaaaagattatctcggagcttctc
cgcagattgaatatgaaagcaagattgtcccttgaaccaatactaatgttagttgctgct
ctatccagggatattctagaggaatttctgccattcttgcaaaggttcactggttcttta
cttgatcttctcaaaggtggtgctgatcgtgatcctgaaatcctagagcaggtctttaca
tcttggtcatatatcttgatgcatttgcagaaatatcttgtaaaggatgttgttcacatt
ctcaagattactgtccgtttaagatttttttcgagggattacatccaggagtttatggct
gagtctgtttcttttgtactaaggaatgcacccattaaccaacttacaaaaggtattaga
aagcttatttttgaggttgccaaaacttcatcatctgtaaggattactggagttgctgct
ttgctgtggcatgttatgagaggtagttcctccaggcttcactcaagagctgaaaaggtg
ttgcagtttttgatggataagtccattgttagtatcagaaatgaatatcctcaaggtatg
gaagcttttcttgaggttgtaactggtattcttcatagattatgcagtgagcttgatcat
aaagaattgaaagtggtttatgattgtttatttagagaaatatctggatgcatcagtgac
ggttgctttgtgcacctaaatcacatattggggcttcttacatttactatacacaatagc
aataacagcagagttttcgataaccaaaagatgtttgaactcattaaattgcttatacaa
gcctacatcactcctgctgattgttcgaagtcagaagatatatcttctgaagttcacgat
agaattttgcaattaatgatttgccttctagatgttcctctcacgtctgatgagttgtca
agcatctcactgttatatgctcctgcatttaagttgagaagctcaagtttgtttgacttt
attaaaggtgttcttctaaaggatcctcacattgcacatgtcttcagaagtcatataata
agtgctatggatgattcaattgaagattcttccaatgaagttctctttttgatgttgaca
ttccttgaaagacaaagtaagcagctacattttgatatcctagatggagtaccagtagat
aaggagcagaaaatatgcatgttctttaataagacaatcgtttattggaccaacttaata
agtgatgtggcaacaagtggcaatcaattagagaagcaaattagtgagtctgaagtagct
atcttatggggagtccttagatgctaccctcattttcaagagctaccagataatttagca
ttgataaaagatttaattgccacccttgatcagcttctggaacttgaagcagaccagctt
gcaactcttccaaagtccacttggcagagtttacttggtgctgcattaagttcatatcat
aaattgttgccaattaagcagctcagacattcagaaacaagtgattttttgcgtcttgct
aagagacacaagacatccccgcaagtattgtctgctgtggctgaatttttggattctgtg
ttctgtgataaatccatggatgaagattctgctcaagatgtattaccagagtttgatgtt
caggaaactgtggcttcagtttgtgcatttgccgataatttgggccttccacataaagca
attcgtatttccactttgaaaatattgtcccattatgcaccactagatcgacagctgcct
acaagtgatgagcgtcctcataaaaagttaaaaacagacaaatctggctcagctaatgaa
gatacgcaatgtcctaatgttattgagctcctccttttggctgaaacaactcctatttca
gtctcaacaagtcggaaaattactatcctgatatccagaatacagatgggtctttcttca
gcaacggtcaatgatggctacatacctcttctcttatatgggattatcggcatcttacat
aatcgctttggtcttttatgggagcctgcattagagtgcctgaccattctgataggcaga
tataaggagctggtttggaatatatttattcagtatcttggcaattatcaatcaaaattt
ctatcctccagcgatcagttgatgaaagtgaatttagaaagtcctcaaccaattgatttg
ggtggttgctttaacaggttcctatatcctgattctgatagcacgccatgcatgaccata
acgactctattgcttcaatcacttcaaaaaattccggacattgcagaatctcggtctcga
caacttatacctttattcttgaaatttatgggttatgatgatgagaatatcttaagtgtt
gagtcattcaactggcataaatgtaaaggaaaagcgtggaagttaattctcaaagaatgg
ctgaacttgttgagattaatgcgcaatgctcgatctttatatcgaagcctggttctgaag
gaagtgttgatgaaaaggcttttggatgacattgatcctgatgtacagttgaaagttctt
gattgcttattgaactggaaggatgattttctgactccgtatgatcagcatttaaaaaat
cttatcaattccaaaaacctccgagaggagctcacaacatgggctctttcgaaagagtcc
caacatattcaggaaggacatagggggcatttgattcccttaattatccggttactaaca
ccaaaagttaggaatcttaaagcattgggcttgcgtaagcatacaggtttaaatcaccgt
agggctgtcctttattttttggcgcaacttgatgtcgatgaacttcagctatttttctct
ttactactaaagcccttgcttgctgatacaatggaagttcttgaagaccagcctgacagg
tcatctgaaaagttcacagatggatttcattcatccgtttttccaaaattttcaacattg
gttactgtatccaatctctcatggaagaagagaactgggtttctgcatgtagttgaagat
attctgaaaacctttgatgaatttcgtgttaagccatttcttaatccattgatgatgatt
gttgttcaaatactggaaaactgcatgttgaacattatgggcgacaatggtaagagaggt
ggttctcttggagataattctgctggtgactcagaggtccatgagacaagtactttggtg
ccagatcctcttatgatgaatacctctatcaaacagttcaaggacttgcggtccttgtgc
ctgaaaattatttcttttgcacttggtagatatgagtttcatgactttggttcagacttc
tgggacattttttttgtttctgtgaagcctcttattgacagcttcaagcaggagggttcc
agtagtgaaaaaccaagttcactttttttatgttttattgcaatgagccgaagccccatg
ctagtcttgctattaattagggaggcaaatcttgtcccaacaattttttccattttaaca
gtgaagactgcatctgacgccatcatatcttctgtactgaatttcatcgagaatctgttg
aacttggacagtgatttggaccatcaagaggacaattcagtaaaaagtgttttggtacct
catcttgagatactcattcatagtttatatgagctttttcagtcccgcaaagattctcac
aggaagtctacagtatgtcctggaaagacagaattgaggatattcaaacttttggtgaaa
tacatcaatgatgctgcagcatcagggttcataggcatattgctcccatttttcaaaaag
agagatataagtactgatgagtgtatggaaggtttgcacgttatcaaagcagtcctgcca
gttttagattatgaaacatcagggaagattctgaaagcaattaacccgttgcttgtttct
gctggattggatctccgcttgtgcatctgtgatgttcttgatggccttgcaatgatcaat
ccttcattagcctttctggctacgcttctacatgagttgaatgcagtttcttcctcggaa
attggtgagctcgattacgataaaagaattggtgcttatgatacaataaggccagagtta
ttcactcaactcagagaggagcatgcattagctgtattatctcactgtatatatgacatg
tcatctgacgaattgatctttcggcaaagtgcatctagagcactgctctcatttatacat
tttgctggatcaattgtaaatggggaaacaagtgattgtcgagaattgcacgtgcatgat
ggagcacaagaagatgcaacagatcaaactgtggaaaaaaataatactagttctacttgg
acgaaggcctgtgttcagcagattgtgaaaaaaactttactgcagaatatgggagaagct
atgagcaaggatatttccatccagaaagaatggattgctctactacgggaaatggtttat
aatcttcgaggtattccttccttgaatacatttagacctctgtgtagtgaggatcctgaa
gtagatttcttcaacaatattcttcacttgcagattcatagaagaagaagggcattgtca
cgtttcagaaatgtcatcagtgctggaaagttggcagagaatgtgactgcgaaaatcttt
cttccattgtttttcaatatgttgtttgatgtcaaagatggaaagggagaggatctaagg
aatgcatgcttggagacacttgcttccatgtcaggtcaaatggattgggaaacctatcgc
acctttttgatgagatgcttccgtgaaatgacccttaagccagataaacaaaagatcctg
ttacggttaatatgtgccgtattggacatgtttcattttaccagtgtgaattctagacag
gtgatagatggagttgaactctgtgcttcgggtgacactgaaaggaatgtaggaattgca
tctcctgctagttcctcggaatcaaatgttccttctgatatagcagtctatttgcaaaag
aaattccttccacaggttctgaaattgctgacatcagaatcagaaaaagtcaatgtcaac
gttagtcttgctgccatcaaattgctgaagttgctaccggtggagactctggaatcacaa
ctttcaagcatcattcatcacacttgtaactttctaaagaatcgtttagaaagcctacgt
gatgaagcaagggctgctttggctgcatgtgcaagggaactggggctggaatacttgcac
ttccttgtcaaggttttgcaagcaatactaaagagggggtatgaattgcatgttttggga
tataccctcaatttcatattatctaaaactcttgtacatcctaccattgggaagcttgat
tactgtttggaagagttgcttttggttgctgagaatgacattctgggtgatgttgctgag
gagaaagaagttgaaaaatttgcttcgaaaatgaaggaaacgaggaagaataagtcgttt
gatactctaaagttgatttctcagagcattactttcagaacacatgcctcgaaattgctt
tccccaattaatgcgcatcttcagaaacaactcacaccaaagacgaaggggaagcttgag
atgatgttacatcatatagctttaggaattgaacacaatccttctgtggaattgtcggaa
ctatttatttttgtgtatgggctgattgaagatagcattacagaagagggtggtcatggc
aaagagatatccatgaatgcgactagcaacaaacctttgcatgaaatgctcaacaaaaaa
aacactttaaactctggtgatcatggactacaaaattctcaccttattgccgaattcgcc
cttggtgtattgcataatcgtttgaagaatatcaagttggacaagaaagatgagcagttg
ttatcaatgttagatcccttcataaaacttttaggaacctgtctgaattccaagtatgaa
aaagttctatcagctgctttcagatgccttgcgccattgataaggctacccttgccatcc
cttgaagcccatgctgataaaattaaaattttgcttttagatattgcccaaaaatcggga
aatgctaacagttcattggttcaatcctgtctgaagcttctcacagtgctacttcgaagc
accaaaatttcactttcaaatgatcaactccacatgcttattcaatttcccctttttatt
gatcttcaaactaatccttcacccattgccctttctcttctaaagtcaatagttggtcga
aagttggttgtccatgaaatatatgacattgccgtgcgagttgcagaagtaatggtaaca
agccagtcagaaccaattcgcaagaaatgcagccaaattctattgcaatttctgctggat
tatcgtctttctgataagcgcttgcaacagcatatggacttcttactcacaaatttgagt
tacgagcattcatctggaagagaagctgtgcttgaaatgctccatgctatcctagtcaaa
tttcccaaaagtgttgttgatagtcaggcacaaacatttttcctccatttagtagttgct
ttagccaatgaccgtgatcaaaaagttcagtccatggttgctaccgtgataaaagtattg
ataggtcgcaccagtcgtcatgcactgcattccattctagactacagtctttcatggtat
ttgagtgaaaaaaagcatctatggagtgctgcagctcaggttcttggtttattggttgaa
gttttaagaaaagacttccatagacacataagtagtatcctccaagtcactaaaggcatt
ttcaaatcttccatgcatgctgttaacaaagaatttgactttgcaaatgatccttcaatt
ccattctggaaggaggcttactactcgcttgttatgctggagaagatgcttctccagttc
ccggagctgtattttgacaagaaccttgaggagttgtggggatggatttgtaaacttttg
ctacatccacatgtatggttgcggaatatttccaaccgccttgtagccttgtattttgct
gctgtttctgaccctggcagaactgatattgagaagttgaacattggaactctgtttctt
gtaaagccaagcaaactttttgcggttgctgcttcactcttgaatcagctcaagctgcag
ctggatgatgatgcagcatgcaatctcataactcagaatcttgtattttcagtttgtggt
ttgcactcttttgctaaacagagaaatagtttgactctgcatgagttttggtgtactctt
gattcttgtgaacaaggatcataccttgaagcttttgagttgcttggttcaagaaaaata
aagaatgctttcctactttccaccagcaatacaagtcaatcttctgcagaaagggaacta
gctcatgaagatgatgctgaaaactttcaatcattgctagttgcacccctgctcaagagg
atgggaaaagttgcaatgcagaaagaagatatccagatgaagataatcttcaattgcttc
agaatgatctcatctcagataggttctgaaggctgcaatgcttatgctattcacatgttg
gttccattatataaagtttgtgaaggatttgctgggaaggtcattggtgatgaaattaag
caactggcattggaggttcgtgacagcataagggatgttctcggggtggatgaatttgtg
cgagtttacaacctgatacggaagaacctcaagggaaagagggagaagagaaaacaagag
cagaaactcgttgctgttatcaatcctatgcgccacgccaagaggaagctgcggattgca
gccaaacatcgagcccataagaagaggaagatattggcaatgaaaatggggacatggcga
aggtaa
DBGET
integrated database retrieval system
