Elaeis guineensis (African oil palm): 105057634
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Entry
105057634 CDS
T03921
Name
(RefSeq) flowering time control protein FY
KO
K15542
polyadenylation factor subunit 2
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105057634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105057634
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105057634
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WD40_Gbeta
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
DSE1_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ASA1
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR41
CFAP251_N
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
eIF2A
NBCH_WD40
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_Vps41
PAC11
Beta-prop_HPS5
WD40_like
Tricorn_2nd
Beta-prop_DCAF12
WD_LRWD1
WDR54
Motif
Other DBs
NCBI-GeneID:
105057634
NCBI-ProteinID:
XP_010938598
UniProt:
A0A6I9SFG6
LinkDB
All DBs
Position
14:54436292..54456450
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AA seq
716 aa
AA seq
DB search
MMYGEQQPGGDFPRGPPMRQPSASSTNLAPEYPHPPPPYEAHGDSFAAKRMRKLVQRRAV
DYTSTVVRYMQVRMWQRDVRDRTVLQPTPAAVLDMLPTVAYADNPSTSFAAKFVHASTNK
NRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDNAIRSMVWSHNENWMV
SGDDGGSIKYWQNNMNNVKANKSAHKESVRDLSFSRTDLKFCSCSDDTTVKVWDFARCQE
ERSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDSKTGRELCSFHGHKNTVLCVKWNQ
NGNWVLTASKDQIIKLYDIRSMKELESFRGHSKDVTALAWHPFHEEYFVSGSFDGSIFHW
LVGHETPQIEIPGAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGDTSRDKYTIGH
GDQNAILAGRTASGFPVPEPPPTPGPFAAGLSRNEGTIPGIGVAMPLSVPSLDGSDQGEQ
RQPIPGILPSGAPPLPPGPHPSLLASGQQQAFQQIPLQAPPQQQQMPFSQQMVSLPLPPP
NLPQLQPPSHLPLLQHPHGPRPPPLQLPPLGSISSSMPGSMPLPSSMAPSLPLPLPNPMV
MQGSGNQMLSPMPQGSMMGLNQMHSGPVNASNIPPVGGFSNGITNIQGATNAAGLQNFPV
GGMFNRPQGGQIGPIPGLNAYQPGMMDVRVPGMALGGNMGLPPPPPPPLPHGSAPQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacggggagcagcagccgggcggggatttccccagagggccgcccatgcgccag
ccctcggcgtcttccactaatctcgctcccgagtacccccaccctccgcctccctacgaa
gcccatggagacagttttgctgctaaaagaatgcgaaagcttgttcaacggcgagcagtg
gactacaccagcacagttgttcgatatatgcaggttcgtatgtggcagcgggatgtaagg
gacagaactgtgttgcaaccaactccagctgcagtcctggatatgttaccaacagttgca
tatgctgataatccatcaacaagctttgctgcaaaatttgttcatgcctctacgaacaaa
aacagatgttcaattaatcgcgtgttgtggacccctacagggcggcgtcttataactggg
tcacaaagtggtgaatttactctttggaatggacagtcttttaactttgaaatgattctt
caggctcatgataatgctattaggtccatggtttggagtcacaacgagaattggatggtc
agtggtgatgatgggggttcaattaagtattggcaaaataacatgaacaatgtcaaggca
aataaatctgctcataaagaatcagtccgggacttaagtttttctagaacagatttaaaa
ttctgttcctgctctgatgacactactgtaaaggtctgggattttgcaaggtgccaagag
gagagatccttaactggccatggttgggatgtcaagagtgttgattggcacccaacaaaa
tctctactggtttcaggtggcaaagacaatcttgtgaaactatgggattcaaaaacagga
agagaactctgttcattccatggtcacaaaaatactgtactttgtgtcaaatggaatcaa
aatggcaactgggtgctgactgcttctaaagatcagataattaagctttatgatattaga
tccatgaaagagcttgaatcatttcgtggacatagcaaggatgtgactgctctggcatgg
catccatttcacgaagaatactttgtcagtgggagttttgatggatccatctttcattgg
cttgttgggcatgaaactcctcagattgaaattcctggggcacatgataacagtgtttgg
gatctagcttggcatcccattggctatttactttgcagtggtagcaatgatcacacaaca
aagttttggtgcagaaacaggcctggagataccagtcgagataaatatacaattggtcat
ggtgatcaaaatgctatccttgctggtcgtacagcgagcggttttccagttccagagcct
ccaccgactccaggaccatttgctgctgggttgtcgcgaaatgaaggaactattccaggt
attggagttgcaatgccactatctgttccatctcttgatgggtcagatcagggagagcag
aggcagcctattccgggtattcttcctagcggcgcacctcctcttccaccaggtccccat
ccatctcttttggcttctgggcagcagcaagcatttcagcaaattcccctgcaagcccca
cctcaacagcaacaaatgccattttcacagcaaatggtttcactgccacttcctccgccg
aacctgcctcagctacagccgccatcacatttgccacttcttcagcatcctcatggacct
cgccctccacctctgcagctgccacctcttggatccatctcctcgtcaatgcctggttcc
atgcccctgccttcgtcaatggctccatcattgcccctacctttgcctaatccaatggtg
atgcaaggttcaggaaatcagatgctctctccaatgccacaaggaagcatgatgggcctt
aatcagatgcactcagggcctgttaacgccagcaatattcctcccgttgggggtttttca
aatgggataacaaatattcagggtgcaacgaatgcagctggactacaaaattttccagtg
ggtggcatgtttaaccggccacaaggtgggcaaataggaccaattccaggattaaatgct
taccagcctggaatgatggatgttcgggtccctggcatggctctaggaggcaatatgggg
cttcccccaccaccaccaccaccacttcctcatggttcagcaccccaatag
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