Elaeis guineensis (African oil palm): 105058040
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Entry
105058040 CDS
T03921
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105058040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105058040
03036 Chromosome and associated proteins [BR:
egu03036
]
105058040
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105058040
Coactivators
SAGA/TFTC/STAGA complex
105058040
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105058040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
105058040
NCBI-ProteinID:
XP_010939114
UniProt:
A0A6I9SGD8
LinkDB
All DBs
Position
15:55828595..55844336
Genome browser
AA seq
971 aa
AA seq
DB search
MDPSIMKLLEDDVDESMHSGADVEAFTAALNRDIGGDAAAISHPSEPDTVGVSSQGSSSA
SKQILGQWENSMQEDNPGQQIQQQEQQHLQSLEQQSSQTELIRQESGAKDKDQQVNSQPE
HDRLLLQQEQSHSENQQLHSEPNPLQFVEKEKAGTSEQTSVQGPKHDITQHSGIQQQHKV
QQLNSQQAPAANQANSSMRRMKVNSSIPFHMLIPILRPHLDKDRSMQLMSIFTKLRTNEV
SKEDFLRVIRNIVGDQMLRQAAQKVQMQQLHAQSTRNAQTNPNQYSLQTQASSQQISAGG
AQQFVESQSVPPLHLTPSSQNQKGPRSPPRQPYPPLSTVQMQADTSNLASNIQKSREIEN
KSDAKGYVTQNFPGNVNTMNAERDISMNSLQAVNKLQQHTQLPQTSFSMYGSTQSNFHGH
PYPRPSISGATTSLKSQTQDSLMRQAPHTQGVVMTQLGPTQPVNVMNMPKSEVQNVTNET
KRLQSGSLTNHAASQHHPVAWQLSANKEQRSGAFPPMSYVKQEVADPPSEPPHKSQFTTP
EGSSFGSLHSNQGNQNLESSKEETLEKQSSKLGYATPASMMGNKAQVSNPMVIQGDQTVQ
NQMQSQISSATPPLQGGPTTRTPQKKPPAGQKKPHEALGTSPPMSSKKQKTTGAFLDQSI
EQLNDVTAVSGVNLREEEEQLLSGPKEESRASEATRRVVQEEEERLILQKGPLQKKLADI
MSKCGLKSISSDVERCLSMCMGERLRGLISYLIRLSKQRVDIEKTRHRFVITSDVRRQIL
FMNKKAKEEWDKKQTEEAEKLRKVNEVEGNAGADTDKDKDEGRSKTLKANKEEDDKMRTT
AANVAARAAVGGDDMLSKWQLMAEQARQKREGLDGASGSQPGKTTTHKTLSSSGRISREQ
QEAEKKGLSAAAISGGMRKLGRSPVTVSHPKVARSISIKDVIAVLEREPQMSKSTLIYQL
YERLSGDSAAE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggatccatccatcatgaagctcctcgaagacgatgtggacgagagcatgcattccggt
gcggatgtggaggcattcacggctgccttgaatcgggatatcggaggcgatgctgctgcc
atctcccacccctcggagcccgatacagttggagtatcatcccaagggagcagttctgca
tcaaaacaaatactaggacaatgggaaaattctatgcaggaggacaatcccggtcagcaa
atccaacaacaagagcaacaacatttgcagtccttagagcagcagtcttctcaaacagaa
ttgatacgacaagaatctggtgccaaagataaagatcaacaagttaacagccaaccggaa
catgaccggttgctgttgcaacaagaacagtctcattctgaaaaccagcagctgcactca
gaaccaaatccccttcaatttgttgaaaaagagaaggctggcacatctgaacaaactagc
gttcagggcccaaaacatgacattactcagcattctgggatccagcagcagcataaagtg
cagcagttgaatagtcaacaagcaccagctgctaaccaagcaaacagttctatgaggagg
atgaaagttaattctagcataccattccacatgttgattccaatcttacgccctcacctg
gacaaagacagatccatgcagcttatgtccatatttacaaaactgaggaccaacgaagtc
agcaaagaagactttttaagggtcataaggaatattgttggggaccagatgcttaggcag
gcagctcagaaagttcaaatgcagcagcttcatgcccagtcaactcgaaatgcacaaaca
aatccaaaccaatactccttacagactcaagcttcctctcagcaaatttcagctggtggt
gctcaacagttcgttgagtcacaatcggttccacctcttcatttaacaccatcatctcag
aaccagaaaggccccagatctcctccacgccaaccttaccctcctctttcaacagtccaa
atgcaggctgatacttcaaaccttgcaagcaatattcagaagtctcgagaaattgagaac
aagtcagatgcaaaggggtatgttacccagaattttcctggtaacgttaatacaatgaat
gcagaaagagacatttctatgaattcactacaagcagttaacaagctgcagcaacacaca
caacttccacagacatctttctcaatgtatggaagcactcaaagtaattttcatggccat
ccatatcctaggccatctatcagtggggcaacaacttctcttaaatcacaaactcaagat
tcactcatgaggcaagctccacatactcagggagtggttatgacccaactagggccaact
cagcctgtgaatgtgatgaacatgcctaaatctgaagtgcaaaatgttaccaacgaaact
aagagactacaaagtggatcattgacaaaccatgcagcatcacaacatcatccagtggca
tggcaattatcggcaaacaaagagcagaggagcggtgcttttccaccaatgtcatatgtg
aaacaagaagttgctgatccaccatctgaacctcctcacaagtctcaattcacaacgcca
gagggctcttcatttggttcattgcatagtaaccagggaaatcaaaatcttgaatcatca
aaggaggaaacattggaaaaacagtcatctaaactgggatatgctacacctgcaagtatg
atgggaaataaagctcaggtatcaaatcccatggtaatccaaggggaccaaaccgtgcag
aatcagatgcaatctcagatttcatctgcaaccccaccacttcagggtggacctactaca
agaactccccaaaagaaaccaccagctgggcagaagaagccacatgaagcactaggcact
tccccacccatgtccagcaaaaagcagaagacgactggagcatttcttgatcaaagcatt
gaacaactaaatgatgttacagctgttagcggggttaacctgagggaagaggaagagcaa
ctgttatcaggccccaaggaggagagtcgagcttcggaagcaacaagaagagttgtacaa
gaagaagaagaacggttgattctgcagaagggtcctcttcagaaaaagctagcagatatc
atgtcaaaatgtggtttaaagagtataagcagtgatgtggagcgttgcctgtcaatgtgc
atgggggagcgtttgcggggtttgataagttacctaataagactatcgaaacagagggtt
gatattgagaagacaagacatcgattcgtcatcacttcagatgttcgacgccagattttg
ttcatgaacaagaaagctaaggaggagtgggacaaaaagcagactgaagaagcggaaaag
ctccgaaaagtaaatgaagtggaggggaatgcaggggctgatactgacaaggacaaggat
gaagggcgttcaaagactcttaaggccaacaaagaagaggatgataagatgagaacgaca
gctgcaaatgttgctgcccgagctgcagttgggggagatgatatgctttcaaagtggcaa
ctgatggctgagcaagctcggcagaaacgggaaggactggatggagcctctggttcccaa
cctggtaaaactaccacccacaagactttatcaagctctggaagaatttctagagaacaa
caagaagctgaaaagaaaggcttgtctgctgcagctatatctgggggcatgagaaaattg
gggagaagtccagtgacagtctctcatccaaaagtggcacgcagcatttctatcaaggat
gtgattgcagtccttgagagggagcctcagatgtctaaatcaactttgatctatcaatta
tatgagcgattatctggtgattctgcagcggaatag
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